Pairwise Alignments

Query, 510 a.a., alpha-hydroxy-acid oxidizing protein from Methanococcus maripaludis S2

Subject, 569 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  180 bits (456), Expect = 1e-49
 Identities = 109/315 (34%), Positives = 168/315 (53%), Gaps = 18/315 (5%)

Query: 180 IGHMSYGALSLNAHKAMAKAVKECGTFMGTGEGGLHRDLYGYSDNVITQVASGRFGVNS- 238
           +  MS+G+L  NA +A+    K  G +  TGEGGL      +  +++ ++ SG FG  + 
Sbjct: 188 VSAMSFGSLGRNAIEALNLGAKTAGCYHDTGEGGLSPYHRMHGGDIVWELGSGYFGARNR 247

Query: 239 ------EYLNKGAA------IEIKIGQGAKPGIGGHLPGEKVSAEVSMTRMIPQGSDAIS 286
                 E   + A       +EIK+ QGAKPG GG LP  KV+ E++  R IP G D IS
Sbjct: 248 DGTFSPERFAERATDPQVKMVEIKLSQGAKPGHGGVLPAAKVTPEIAEIRGIPHGEDCIS 307

Query: 287 PAPHHDIYSIEDLAQLIRSLKEATRWKMPVFVKISAVH--NVSAIANGIATS--DADAVV 342
           P+ H    +   + + +  L+E +  K PV +K+   H   V A+A  +  +    D VV
Sbjct: 308 PSRHSAFSTPAQMMEFVAQLRELSGGK-PVGIKLCVGHPSEVFALAKAMVKTGIQPDFVV 366

Query: 343 IDGFKGGTGAAPKVFRDNVGIPIEVAIAAVDDRLREQGNRHKISIIASGGIRNSADVFKS 402
           +DG +GGTGAAP    D++G+P+   +  + + L   G RH++ + ASG + +   +  +
Sbjct: 367 VDGAEGGTGAAPHELADHLGMPLREGLILMRNALVGTGLRHEVRLAASGKVTSGFSMAAN 426

Query: 403 IALGADAVYIGTAAMVAMGCTVCGRCYTGQCAWGIATQKPELVKRLEVDDAARRVANLIH 462
           +A+GAD      A M ++GC +  RC+TG C  G+ T  P L + L VD+ A RVAN   
Sbjct: 427 MAIGADWCNAARAFMFSLGCVMSMRCHTGTCPTGVTTNDPHLQRGLVVDEKAERVANFHR 486

Query: 463 AWTHEIQELLGAAGI 477
              H + EL+ AAG+
Sbjct: 487 HSVHALAELVAAAGL 501