Pairwise Alignments

Query, 510 a.a., alpha-hydroxy-acid oxidizing protein from Methanococcus maripaludis S2

Subject, 445 a.a., Isopentenyl-diphosphate delta-isomerase from Xanthobacter sp. DMC5

 Score =  215 bits (547), Expect = 3e-60
 Identities = 132/328 (40%), Positives = 179/328 (54%), Gaps = 17/328 (5%)

Query: 172 LKLDTPIMIGHMSYGALSLNAHKAMAKAVKECGTFMGTGEGGLHRDLYGYSDNVITQVAS 231
           + L TP+ I  MS+GALS  A +A+ +     GT   TG+GG+  +  G S  ++ Q   
Sbjct: 86  ITLKTPVTIAGMSFGALSAQAKEALGRGASTVGTSTTTGDGGMTPEERGQSKTLVYQYLP 145

Query: 232 GRFGVNSEYLNKGAAIEIKIGQGAKPGIGGHLPGEKVSAEVSMTRMIPQGSDAISPAPHH 291
            R+G+N   L K  AIEI IGQGAKPG GG L G+K+S  V+  R +P+G D  S   H 
Sbjct: 146 SRYGMNPVDLRKADAIEIVIGQGAKPGGGGMLLGQKISDRVAAMRTLPKGIDQRSACRHP 205

Query: 292 DIYSIEDLAQLIRSLKEATRWKMPVFVKISAVHNVSAIANGIATSDADAVVIDGFKGGTG 351
           D    +DL   I  L+E T W+ P++VK+ A       A  +  + AD VV+DG +GGT 
Sbjct: 206 DWTGPDDLEIKIEELREITDWEKPIYVKVGASRPYYDTALAV-KAGADVVVLDGMQGGTA 264

Query: 352 AAPKVFRDNVGIPIEVAIAAVDDRLREQGNRHKISIIASGGIRNSADVFKSIALGADAVY 411
           A   VF ++VGIPI  AI      L++     K+ +I SGGIR  ADV K++ALGADAV 
Sbjct: 265 ATQDVFIEHVGIPILAAIRPAVQALQDLDMHRKVQLIVSGGIRTGADVAKALALGADAVA 324

Query: 412 IGTAAMVAMG----------------CTVCGRCYTGQCAWGIATQKPELVKRLEVDDAAR 455
           IGTAA+VA+G                       + G+   GI TQ PEL KRL+   A R
Sbjct: 325 IGTAALVALGDNDPQWEDEYQALGSTAGAYDDWHEGRDPAGITTQDPELSKRLDPVKAGR 384

Query: 456 RVANLIHAWTHEIQELLGAAGINSIESL 483
           R+AN +   T E Q +  A G + + +L
Sbjct: 385 RLANYLSVMTLEAQTIARACGKSHLHNL 412