Pairwise Alignments

Query, 510 a.a., alpha-hydroxy-acid oxidizing protein from Methanococcus maripaludis S2

Subject, 1567 a.a., Ferredoxin-dependent glutamate synthase 1 from Xanthobacter sp. DMC5

 Score =  214 bits (546), Expect = 1e-59
 Identities = 126/331 (38%), Positives = 174/331 (52%), Gaps = 9/331 (2%)

Query: 166  TKIAPNLKLDTPIMIGHMSYGALSLNAHKAMAKAVKECGTFMGTGEGGLHRDLYGYSDN- 224
            +++ P  ++    + G MS+G++S  AH  +A A+   G    TGEGG   + +    N 
Sbjct: 899  SEVEPASEIVKRFVTGAMSFGSISREAHTTLAIAMNRIGGKSNTGEGGEEPERFKPLPNG 958

Query: 225  -----VITQVASGRFGVNSEYLNKGAAIEIKIGQGAKPGIGGHLPGEKVSAEVSMTRMIP 279
                  I QVASGRFGV +EYL     ++IK+ QGAKPG GG LPG KV A ++  R   
Sbjct: 959  DSMRSAIKQVASGRFGVTAEYLVNSDVMQIKVAQGAKPGEGGQLPGHKVDAVIAKVRHST 1018

Query: 280  QGSDAISPAPHHDIYSIEDLAQLIRSLKEATRWKMPVFVKISAVHNVSAIANGIATSDAD 339
             G   ISP PHHDIYSIEDLAQLI  LK        V VK+ +   V  +A G+A + AD
Sbjct: 1019 PGVGLISPPPHHDIYSIEDLAQLIYDLKNVNP-DADVSVKLVSEVGVGTVAAGVAKARAD 1077

Query: 340  AVVIDGFKGGTGAAPKVFRDNVGIPIEVAIAAVDDRLREQGNRHKISIIASGGIRNSADV 399
             + I GF+GGTGA+P     + G P E+ +A     L     R ++++   GG+R   DV
Sbjct: 1078 HITISGFEGGTGASPLTSIKHAGSPWEMGLAETQQTLVANRLRSRVALQVDGGLRTGRDV 1137

Query: 400  FKSIALGADAVYIGTAAMVAMGCTVCGRCYTGQCAWGIATQKPELVKRLEVDDAARRVAN 459
                 LGAD     TA ++A GC +  +C+   C  G+ATQ P L KR +       V N
Sbjct: 1138 VIGALLGADEFAFSTAPLIAAGCIMMRKCHLNTCPVGVATQDPVLRKRFK--GTPEHVIN 1195

Query: 460  LIHAWTHEIQELLGAAGINSIESLRGNRDRL 490
                   E++EL+ + G   +E + G  D L
Sbjct: 1196 YFFFIAEEVRELMASLGFRKVEEMVGRADVL 1226



 Score = 32.7 bits (73), Expect = 1e-04
 Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 8/67 (11%)

Query: 119 QVTNPSIDPLREP--MELRTYVGKKPEKLEFDYVEDEIDGKKVKKAKLKTKIAPNLKLDT 176
           QVTNP IDP+RE   M L +++G +P   + +         + K+ +++  I  N  L+ 
Sbjct: 550 QVTNPPIDPIREELVMSLVSFIGPRPNIFDLE------GNARRKRLEVRQPILTNEDLEK 603

Query: 177 PIMIGHM 183
              IG M
Sbjct: 604 IRSIGFM 610