Pairwise Alignments

Query, 510 a.a., alpha-hydroxy-acid oxidizing protein from Methanococcus maripaludis S2

Subject, 1481 a.a., glutamate synthase from Pseudomonas simiae WCS417

 Score =  216 bits (551), Expect = 4e-60
 Identities = 133/333 (39%), Positives = 175/333 (52%), Gaps = 18/333 (5%)

Query: 174  LDTPIMIGHM---------------SYGALSLNAHKAMAKAVKECGTFMGTGEGGLHRDL 218
            LDTP+ I  +               S GALS  AH+A+A+A+   G    +GEGG     
Sbjct: 838  LDTPLTISEIEPLESILKRFDSAGISLGALSPEAHEALAEAMNRLGARSNSGEGGEDPAR 897

Query: 219  YG-YSDNVITQVASGRFGVNSEYLNKGAAIEIKIGQGAKPGIGGHLPGEKVSAEVSMTRM 277
            YG    + I QVA+GRFGV  EYL     ++IK+ QGAKPG GG LPG KV+  ++  R 
Sbjct: 898  YGTIKSSKIKQVATGRFGVTPEYLVNAEVLQIKVAQGAKPGEGGQLPGGKVNGLIAKLRY 957

Query: 278  IPQGSDAISPAPHHDIYSIEDLAQLIRSLKEATRWKMPVFVKISAVHNVSAIANGIATSD 337
               G   ISP PHHDIYSIEDL+QLI  LK+     + V VK+ A   V  IA G+A + 
Sbjct: 958  AVPGVTLISPPPHHDIYSIEDLSQLIFDLKQVNPQAL-VSVKLVAEAGVGTIAAGVAKAY 1016

Query: 338  ADAVVIDGFKGGTGAAPKVFRDNVGIPIEVAIAAVDDRLREQGNRHKISIIASGGIRNSA 397
            AD + I G+ GGTGA+P       G P E+ +A     LR    R K+ +   GG++   
Sbjct: 1017 ADLITISGYDGGTGASPLTSIKYAGAPWELGLAETHQTLRGNDLRGKVRVQTDGGLKTGL 1076

Query: 398  DVFKSIALGADAVYIGTAAMVAMGCTVCGRCYTGQCAWGIATQKPELVKRLEVDDAARRV 457
            DV K+  LGA++   GTA M+A+GC     C+   CA G+ATQ  +L K   +      V
Sbjct: 1077 DVIKAAILGAESFGFGTAPMIALGCKYLRICHLNNCATGVATQNEKLRKDHYI-GTVDMV 1135

Query: 458  ANLIHAWTHEIQELLGAAGINSIESLRGNRDRL 490
             N       E +E L   G+ S+E L G  D L
Sbjct: 1136 VNFFTYVAEETREWLAKLGVRSLEELIGRTDLL 1168



 Score = 26.6 bits (57), Expect = 0.007
 Identities = 11/12 (91%), Positives = 11/12 (91%)

Query: 119 QVTNPSIDPLRE 130
           QVTNP IDPLRE
Sbjct: 512 QVTNPPIDPLRE 523