Pairwise Alignments

Query, 510 a.a., alpha-hydroxy-acid oxidizing protein from Methanococcus maripaludis S2

Subject, 539 a.a., glutamate synthase from Pseudomonas simiae WCS417

 Score =  155 bits (391), Expect = 4e-42
 Identities = 116/341 (34%), Positives = 170/341 (49%), Gaps = 25/341 (7%)

Query: 180 IGHMSYGALSLNAHKAMAKAVKECGTFMGTGEGGL---HRDLYGYSDNVITQVASGRFGV 236
           I  MS+G+LS NA +A+ +  K       TGEG +   HR+  G   ++  ++ SG FG 
Sbjct: 161 ISAMSFGSLSANAIRALNQGAKLGNFAHDTGEGSISPYHRENGG---DLTWELGSGYFGC 217

Query: 237 NSE-------------YLNKGAAIEIKIGQGAKPGIGGHLPGEKVSAEVSMTRMIPQGSD 283
            +                 +   IEIK+ QGAKPG GG LP  KV+ E++ TR I  G D
Sbjct: 218 RTSDGRFDPERFAVQAQNPQVRMIEIKMSQGAKPGHGGILPKHKVTQEIADTRGILMGED 277

Query: 284 AISPAPHHDIYSIEDLAQLIRSLKEATRWKMPVFVKISAVH--NVSAIANGIATSDA--D 339
            ISP+ H    +  +L   I  L+E +  K PV  K    H      IA  +  +    D
Sbjct: 278 CISPSRHSAFSTPIELMHFIAQLRELSGGK-PVGFKFCLGHPWEFMGIAKAMLETGILPD 336

Query: 340 AVVIDGFKGGTGAAPKVFRDNVGIPIEVAIAAVDDRLREQGNRHKISIIASGGIRNSADV 399
            +V+DG +GGTGAAP  F D++G+P+   +  V + L     R KI + ASG I ++ D+
Sbjct: 337 FIVVDGKEGGTGAAPVEFTDHIGVPLREGLLFVHNTLVGLNLRDKIKLGASGKIVSAFDI 396

Query: 400 FKSIALGADAVYIGTAAMVAMGCTVCGRCYTGQCAWGIATQKPELVKRLEVDDAARRVAN 459
              +A+GAD        M A+GC     C+T +C  G+ATQ P   + L V D A+RV N
Sbjct: 397 ASVLAIGADWANSARGFMFAIGCIQSQSCHTNKCPTGVATQDPLRQRALVVPDKAQRVFN 456

Query: 460 LIHAWTHEIQELLGAAGINSIESLRGNRDRLRGVGLSEIEL 500
                   + E+L AAG++    L   +  +R +  +EI+L
Sbjct: 457 FHRNTLKALAEMLAAAGLDHPSQLSA-KHLVRRMSATEIKL 496