Pairwise Alignments

Query, 510 a.a., alpha-hydroxy-acid oxidizing protein from Methanococcus maripaludis S2

Subject, 555 a.a., putative Glutamate synthase, large subunit from Pseudomonas putida KT2440

 Score =  172 bits (436), Expect = 3e-47
 Identities = 122/341 (35%), Positives = 173/341 (50%), Gaps = 25/341 (7%)

Query: 180 IGHMSYGALSLNAHKAMAKAVKECGTFMGTGEGGLHRDLYGYSDNVITQVASGRFGVNSE 239
           I  MS+GALS NA  A+ +  +       TGEG +      +  ++I ++ SG FG  +E
Sbjct: 162 ISAMSFGALSANAIAALNRGARMGRFAHDTGEGSISPYHREHGGDLIWEIGSGYFGCRTE 221

Query: 240 --------YLNKGAA-----IEIKIGQGAKPGIGGHLPGEKVSAEVSMTRMIPQGSDAIS 286
                   +  +  +     IEIK+ QGAKPG GG LPG KVS E++ TR +  G D IS
Sbjct: 222 DGRFDPQRFAEQARSAQVKMIEIKLSQGAKPGHGGILPGHKVSPEIAETRGVRAGEDCIS 281

Query: 287 PAPHHDIYSIEDLAQLIRSLKEATRWKMPVFVKISAVHN-------VSAIANGIATSDAD 339
           PA H    +  +L Q +  L+E +  K PV  K    H         + +A GI     D
Sbjct: 282 PAAHSAFRTPVELLQFVAGLRELSGGK-PVGFKFCLGHPWEFMGIAKAMLATGITP---D 337

Query: 340 AVVIDGFKGGTGAAPKVFRDNVGIPIEVAIAAVDDRLREQGNRHKISIIASGGIRNSADV 399
            +V+DG +GGTGAAP+ F DN+G+P+   +  V + L     R  I I A+G I ++ D+
Sbjct: 338 FIVVDGKEGGTGAAPREFSDNMGVPMREGLMFVHNTLVGLNLRSSIRIGAAGKIVSAFDI 397

Query: 400 FKSIALGADAVYIGTAAMVAMGCTVCGRCYTGQCAWGIATQKPELVKRLEVDDAARRVAN 459
              +A+GAD V      M A+GC     C+T +C  G+ATQ P   + L V D A RVA+
Sbjct: 398 ASVLAIGADWVNSARGFMFAIGCIQSQSCHTNKCPTGVATQDPLRQRALVVPDKAERVAS 457

Query: 460 LIHAWTHEIQELLGAAGINSIESLRGNRDRLRGVGLSEIEL 500
                 H + E+L AAG+     L+  +   R V  SEI L
Sbjct: 458 FHRNTLHALAEMLAAAGLEHPSELK-PKHLARRVSPSEIGL 497