Pairwise Alignments

Query, 510 a.a., alpha-hydroxy-acid oxidizing protein from Methanococcus maripaludis S2

Subject, 1486 a.a., Glutamate synthase [NADPH] large chain (EC 1.4.1.13) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  219 bits (559), Expect = 4e-61
 Identities = 137/360 (38%), Positives = 188/360 (52%), Gaps = 7/360 (1%)

Query: 133  ELRTYVGKKPEKLEFDYVEDEIDGKKVKKAKLKTKIAPNLKLDTPIMIGHMSYGALSLNA 192
            E    V ++P     D +    DG+ V   +++       + DT  M    S GALS  A
Sbjct: 817  EYAKLVNERPASTLRDLLAIHPDGEAVTIDEVEPASELFKRFDTAAM----SIGALSPEA 872

Query: 193  HKAMAKAVKECGTFMGTGEGGLHRDLYGYSD-NVITQVASGRFGVNSEYLNKGAAIEIKI 251
            H+A+A+A+   G    +GEGG     YG +  + I QVASGRFGV   YL     I+IK+
Sbjct: 873  HEALAEAMNSLGGNSNSGEGGEDPARYGTNKVSRIKQVASGRFGVTPAYLVNADVIQIKV 932

Query: 252  GQGAKPGIGGHLPGEKVSAEVSMTRMIPQGSDAISPAPHHDIYSIEDLAQLIRSLKEATR 311
             QGAKPG GG LPG+KV+  ++  R    G   ISP PHHDIYSIEDLAQLI  LK+   
Sbjct: 933  AQGAKPGEGGQLPGDKVTPYIAKLRYSVPGVTLISPPPHHDIYSIEDLAQLIFDLKQVNP 992

Query: 312  WKMPVFVKISAVHNVSAIANGIATSDADAVVIDGFKGGTGAAPKVFRDNVGIPIEVAIAA 371
             K  + VK+ +   V  IA G+A + AD + I G+ GGTGA+P       G P E+ +  
Sbjct: 993  -KAMISVKLVSEPGVGTIATGVAKAYADLITIAGYDGGTGASPLSSVKYAGCPWELGLVE 1051

Query: 372  VDDRLREQGNRHKISIIASGGIRNSADVFKSIALGADAVYIGTAAMVAMGCTVCGRCYTG 431
                L   G RHKI +   GG++   D+ K+  LGA++   GT  MVA+GC     C+  
Sbjct: 1052 TQQALVANGLRHKIRLQVDGGLKTGVDIIKAAILGAESFGFGTGPMVALGCKYLRICHLN 1111

Query: 432  QCAWGIATQKPELVKRLEVDDAARRVANLIHAWTHEIQELLGAAGINSIESLRGNRDRLR 491
             CA G+ATQ  +L K         +V N       E++EL+ + G+  +  L G  D L+
Sbjct: 1112 NCATGVATQDDKLRKN-HYHGLPFKVTNYFEFIAREVRELMASLGVTRLVDLIGRTDLLK 1170



 Score = 31.2 bits (69), Expect = 3e-04
 Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 2/36 (5%)

Query: 108 IYFDKIVLDACQVTNPSIDPLREP--MELRTYVGKK 141
           I +D       QVTNP IDPLRE   M L T +G++
Sbjct: 501 IIYDYFRQQFAQVTNPPIDPLREAHVMSLATSIGRE 536