Pairwise Alignments

Query, 510 a.a., alpha-hydroxy-acid oxidizing protein from Methanococcus maripaludis S2

Subject, 1581 a.a., glutamate synthase large subunit from Agrobacterium fabrum C58

 Score =  217 bits (553), Expect = 2e-60
 Identities = 124/318 (38%), Positives = 171/318 (53%), Gaps = 11/318 (3%)

Query: 181  GHMSYGALSLNAHKAMAKAVKECGTFMGTGEGGLHRDLY--------GYSDNVITQVASG 232
            G MS+G++S  AH  +A A+ + G    TGEGG   D Y            + I Q+ASG
Sbjct: 927  GAMSFGSISREAHTTLAIAMNQIGGKSNTGEGGEESDRYLPLLNGKPNPERSAIKQIASG 986

Query: 233  RFGVNSEYLNKGAAIEIKIGQGAKPGIGGHLPGEKVSAEVSMTRMIPQGSDAISPAPHHD 292
            RFGV +EYL     ++IK+ QGAKPG GG LPG KV A V+ TR    G   ISP PHHD
Sbjct: 987  RFGVTTEYLVNADMLQIKVAQGAKPGEGGQLPGHKVDATVAKTRHSTPGVGLISPPPHHD 1046

Query: 293  IYSIEDLAQLIRSLKEATRWKMPVFVKISAVHNVSAIANGIATSDADAVVIDGFKGGTGA 352
            IYSIEDLAQLI  LK     +  V VK+ +   V  +A G+A + AD + + GF GGTGA
Sbjct: 1047 IYSIEDLAQLIYDLKNVNP-EADVSVKLVSEVGVGTVAAGVAKARADHITVSGFDGGTGA 1105

Query: 353  APKVFRDNVGIPIEVAIAAVDDRLREQGNRHKISIIASGGIRNSADVFKSIALGADAVYI 412
            +P     + G P E+ +A     L   G R ++++   GG++   DV     LGAD    
Sbjct: 1106 SPLTSLKHAGSPWEIGLAETQQTLVLNGLRSRVALQVDGGLKTGRDVIIGALLGADEFGF 1165

Query: 413  GTAAMVAMGCTVCGRCYTGQCAWGIATQKPELVKRLEVDDAARRVANLIHAWTHEIQELL 472
             TA ++A GC +  +C+   C  G+ATQ P L KR +       V N       E++E+L
Sbjct: 1166 ATAPLIAAGCIMMRKCHLNTCPVGVATQDPVLRKRFK--GTPEHVINYFFFVAEEVREIL 1223

Query: 473  GAAGINSIESLRGNRDRL 490
             + G+  ++ + G  + L
Sbjct: 1224 ASLGVTRLDEIIGASELL 1241



 Score = 36.6 bits (83), Expect = 7e-06
 Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 8/66 (12%)

Query: 119 QVTNPSIDPLREP--MELRTYVGKKPEKLEFDYVEDEIDGKKVKKAKLKTKIAPNLKLDT 176
           QVTNP IDP+RE   M L +++G +P  L      D     + K+ +++  I  N  L+ 
Sbjct: 561 QVTNPPIDPIREELVMSLVSFIGPRPNLL------DHEGAARAKRLEVRQPILTNGDLEK 614

Query: 177 PIMIGH 182
              IGH
Sbjct: 615 IRSIGH 620