Pairwise Alignments

Query, 510 a.a., alpha-hydroxy-acid oxidizing protein from Methanococcus maripaludis S2

Subject, 1782 a.a., glutamate synthase large subunit from Agrobacterium fabrum C58

 Score =  189 bits (481), Expect = 6e-52
 Identities = 122/313 (38%), Positives = 163/313 (52%), Gaps = 13/313 (4%)

Query: 181  GHMSYGALSLNAHKAMAKAVKECGTFMGTGEGGLHRDLYG-YSDNVITQVASGRFGVNSE 239
            G MS+GAL   AH+A+A      G    +GEGG H   YG    + I Q ASGRFGV + 
Sbjct: 963  GAMSHGALVAAAHEAVAHGTNMVGGMSNSGEGGEHISRYGTIRASRIKQFASGRFGVWAG 1022

Query: 240  YLNKGAA--IEIKIGQGAKPGIGGHLPGEKVSAEVSMTRMIPQGSDAISPAPHHDIYSIE 297
            YL       IEIKIGQGAKPG GG LP  KV+ E++  R    G + +SP PHHD YSIE
Sbjct: 1023 YLADPMLEEIEIKIGQGAKPGEGGQLPSPKVTVEIAAARGGTPGVELVSPPPHHDTYSIE 1082

Query: 298  DLAQLIRSLKEATRWKMPVFVKISAVHNVSAIANGIATSDADAVVIDGFKGGTGAAPKVF 357
            DLAQLI   K A   ++ V VK+ +   +  IA G+A + AD + + G  GGTGAA    
Sbjct: 1083 DLAQLIHDAKAA---RVRVIVKLVSSEGIGTIAVGVAKAGADVINVAGNTGGTGAAAVTS 1139

Query: 358  RDNVGIPIEVAIAAVDDRLREQGNRHKISIIASGGIRNSADVFKSIALGADAVYIGTAAM 417
                G   E+ IA V   L   G R K+ +  SG  + ++DV KS  LG D+   GT A+
Sbjct: 1140 LKYTGRAAEIGIAEVHQALCATGLRAKVLLRCSGAHQTASDVVKSALLGGDSFEFGTTAL 1199

Query: 418  VAMGCTVCGRCYTGQCAWGIATQKPELVKRLEVDDAARRVANLIHAWTHEIQELLGAAGI 477
            + + C +   C   +C  G+ T +         +   R +A  +    HE +E+L   G+
Sbjct: 1200 MMLKCVMAKNCNI-KCPAGLTTNQEAF------NGDPRALAQYLMNIAHETREILAGLGL 1252

Query: 478  NSIESLRGNRDRL 490
             S+   RG  D L
Sbjct: 1253 RSLREARGRSDLL 1265



 Score = 28.5 bits (62), Expect = 0.002
 Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 27/112 (24%)

Query: 119 QVTNPSIDPLREP--MELRTYVGKKPEKLEFDYVEDEIDGKKVKKAKLKTKIAPNLKL-- 174
           QVTNP +D +RE   M LR  +G KP              KK ++  +++ I  +L +  
Sbjct: 463 QVTNPPLDSIREADGMTLRVALGAKPNS----------GAKKARQIVVRSPILTHLDMLR 512

Query: 175 -----DTPIMIGHMSYGALSLNAHKAMAKAVKE-----CGTFM--GTGEGGL 214
                +TP+    M Y  +  +A  A   A+++     CG  +     EGG+
Sbjct: 513 IREQPETPVRRFEMLYTPV-FDAEDANEAALRQAIDGLCGEVVAFAAEEGGI 563