Pairwise Alignments

Query, 281 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 552 a.a., Sulfite reductase [ferredoxin] from Pseudomonas sp. DMC3

 Score = 50.8 bits (120), Expect = 6e-11
 Identities = 42/159 (26%), Positives = 79/159 (49%), Gaps = 9/159 (5%)

Query: 1   MNKNEIANLKMQ-GFILQNDGKHFALRIKTDAGCMDSEKIDKLSEISKKYGRNYISFTVR 59
           +++ E   L++Q G  +Q       LR+    G + S ++  +++I++ Y + Y   + R
Sbjct: 31  LSEEEFRPLRLQNGLYIQRFAP--MLRVAVPYGQLTSRQVRMMAKIARDYDKGYAHISTR 88

Query: 60  LCVEIPWINYEDIPKIKEELKNLSLISGGT-GNTVRPLVACK-GTVCTHGLIDSQKICNE 117
             V+  W   EDIP I  EL  + + +  T GN +R +   +   V    +ID +  C  
Sbjct: 89  QNVQFNWPAVEDIPDILAELATVQMHAIQTSGNCLRNVTTDQFAGVAADEVIDPRPWCEI 148

Query: 118 LD--SLFFGK--KLPHKFKIGISGCPNNCAKAQLNDIGI 152
           +   + F  +   LP KFKI ++G  ++ A  +++DIG+
Sbjct: 149 VRQWTTFHPEFAYLPRKFKIAVNGSTSDRAAIEVHDIGL 187



 Score = 40.0 bits (92), Expect = 1e-07
 Identities = 49/253 (19%), Positives = 91/253 (35%), Gaps = 60/253 (23%)

Query: 32  GCMDSEKIDKLSEISKKYGRNYISFTVRLCVEIPWINYEDIPKIKEELKNLSLISGGTGN 91
           G +  +++D +++++++Y    +  +    + +  +    +  +  EL+     +   G 
Sbjct: 349 GDITDKQLDAVADLAERYSFGQLRTSHEQNIILADVEQSQLFTLWGELREGGFATPNIGL 408

Query: 92  TVRPLVACKGTVCTHGLIDSQKICNELDSLFFGKKLPHKFKIG-----ISGCPNNCAKAQ 146
               +    G  C+     S  I   +   F    L + F IG     ISGC N C    
Sbjct: 409 LTDIICCPGGDFCSLANAKSIPIAESIQRRF--DDLDYLFDIGELDLNISGCMNACGHHH 466

Query: 147 LNDIGIIGQRIPKINEENCNGCTLCLKSCSVDAITIVDKKAVIDYEKCVNCGKCGKSCKR 206
           +  IGI+G                            VDKK    Y+              
Sbjct: 467 VGHIGILG----------------------------VDKKGEEFYQ-------------- 484

Query: 207 KCISLKDGVLISVGGKFGKKYKIGENIGIYDAPN-LEKIVSEIMDYFKENADSHERFGDT 265
                     +S+GG   +   +G+ +G   A   +  ++S+++D + E     ERF DT
Sbjct: 485 ----------VSLGGSASRDASLGKILGPSFAQEAMPDVISKLIDVYVEQRTEDERFIDT 534

Query: 266 IDRTGISSLKEKL 278
             R GI   KE++
Sbjct: 535 YQRIGIDLFKERV 547