Pairwise Alignments

Query, 411 a.a., ammonium transporter from Methanococcus maripaludis S2

Subject, 428 a.a., Ammonia channel from Escherichia coli HS(pFamp)R (ATCC 700891)

 Score =  157 bits (396), Expect = 7e-43
 Identities = 127/426 (29%), Positives = 201/426 (47%), Gaps = 55/426 (12%)

Query: 16  ALNTLANSSDVMFLIFTGAFIFIMHL-GFAMLEGGQVREKNVNNAMMKNMGDWIIGCISW 74
           A   +A+ +D  F++   A +  M + G A+  GG +R KNV + + +    + + CI W
Sbjct: 22  AAPAVADKADNAFMMICTALVLFMTIPGIALFYGGLIRGKNVLSMLTQVTVTFALVCILW 81

Query: 75  LLVGSVIARTLNPADFFIWWGKIASATPFLTN-NGLELANWFLGLV-------------- 119
           ++ G  +A                    F  N N L L N  L  V              
Sbjct: 82  VVYGYSLA--------------FGEGNNFFGNINWLMLKNIELTAVMGSIYQYIHVAFQG 127

Query: 120 -FAATAATIVAGGIAERIKFKSYILISIVITALLYPFFSYLGPWGAGVIPFH---DYAGS 175
            FA     ++ G +AERI+F + ++  +V   L Y   +++  WG G++  H   D+AG 
Sbjct: 128 SFACITVGLIVGALAERIRFSAVLIFVVVWLTLSYIPIAHM-VWGGGLLASHGALDFAGG 186

Query: 176 LMVHGVGGFLALGLIAA--IGPRFGRFVNKKAITIPGHNIPMSILGAYILAFGWYGFNVG 233
            +VH +   +A GL+ A  IG R G    K+A     HN+PM   G  IL  GW+GFN G
Sbjct: 187 TVVH-INAAIA-GLVGAYLIGKRVG--FGKEA--FKPHNLPMVFTGTAILYIGWFGFNAG 240

Query: 234 SSLALSDISGLVCATTTLAMAGGGLG-----GCLFSKNDVLYTANGLLAGTVAICAGTDI 288
           S+   ++I+ L    T +A A   LG       L  K  +L   +G +AG V +      
Sbjct: 241 SAGTANEIAALAFVNTVVATAAAILGWIFGEWALRGKPSLLGACSGAIAGLVGVTPACGY 300

Query: 289 VSPLGALIIGFIAG-SQVPLIFKIVEKMGLDDVCGVIPVHATSGALGAILAGIFGMTAFG 347
           +   GALIIG +AG + +  +  +   + +DD C V  VH   G +G I+ GIF  ++ G
Sbjct: 301 IGVGGALIIGVVAGLAGLWGVTMLKRLLRVDDPCDVFGVHGVCGIVGCIMTGIFAASSLG 360

Query: 348 GVG---GVSLTEQIIA---TLICAVYGTGAGFILGKLVGAVTGGLRVKESEEKAGLDISI 401
           GVG   GV++  Q++    ++   +  +G    +G  +  +T GLRV E +E+ GLD++ 
Sbjct: 361 GVGFAEGVTMGHQLLVQLESIAITIVWSGVVAFIGYKLADLTVGLRVPEEQEREGLDVNS 420

Query: 402 HKLPAY 407
           H   AY
Sbjct: 421 HGENAY 426