Pairwise Alignments

Query, 408 a.a., ammonium transporter from Methanococcus maripaludis S2

Subject, 498 a.a., Ammonia channel from Xanthobacter sp. DMC5

 Score =  143 bits (361), Expect = 1e-38
 Identities = 131/456 (28%), Positives = 203/456 (44%), Gaps = 84/456 (18%)

Query: 24  GDVMFLVLMGVLVFSMQL-GFALLEGGQVRKKNVNNVMMKNMAD-------WLIGAVSWL 75
           GDV +++   +LV  M + G  L  GG VR KN+ +V+M+           W++   S  
Sbjct: 51  GDVAWMLTSALLVLMMSVPGLFLFYGGLVRAKNMLSVLMQVAYSVCIVGLIWVLYGYSLA 110

Query: 76  FIGGVLSVSLVPADFFSW-WGQIFTTNFANNGIDLANWF---FGLVFAATAATIVSGGVA 131
           F GG   +      F S   G+     F+  G+ +  W    F + FA     ++ G  A
Sbjct: 111 FTGGSPFIGGFSKAFLSGVTGESLAATFSV-GVAIPEWVYIAFQMTFAMITPALIFGAFA 169

Query: 132 ERIKFKSYLL-MSIIITAILYPLFVYLGPWG----------------------------- 161
           ER+KF + +L + + +T + +P+   +  W                              
Sbjct: 170 ERMKFSAVVLFVPLWVTFVYFPIAHMVWYWAGPDAIDAAAKALAAAADGTAKAAAQQALD 229

Query: 162 -----SGMIPFN----DYAGSFVVHGLGGFLALGAIAALGPRIGKFVNKKAISIPGHNIP 212
                SG I F     D+AG  VVH   G   L A   +G R+G    K+A+S   H++ 
Sbjct: 230 AVNADSGYI-FQLGAIDFAGGTVVHINAGIAGLVACIMVGKRLG--YGKEALS--PHSLT 284

Query: 213 MSVFGAFVLAIGWYGFNVGSSFAVADISGLVCATTTLAMAGGG-----IGALLASKDDVL 267
           +++ GA +L +GW+GFN GS+      + L    T +A    G     +  L+  K  +L
Sbjct: 285 LTMVGASLLWVGWFGFNAGSNLEANATTALAMMNTFIATCAAGMSWMFVEWLVKGKPSML 344

Query: 268 FTANGIVAGLVAICSGTDVVSPIGALIIGLVAGIQVPIVY----KIVEKMGLDDVCGVIP 323
             A+GIVAGLVA+   +     +G+L++GLV     PI +     +   +G DD   V  
Sbjct: 345 GLASGIVAGLVAVTPPSGFAGIMGSLVLGLVVS---PICFIFCTAVKNALGYDDALDVFG 401

Query: 324 VHGTAGILGGILTGVFGMAALGGAG--------------GVSLVNQLIAAGLTVVYGTGL 369
           VHG  GI+G I TG+    +LGG G                 ++ QL A G+TVV+ +G+
Sbjct: 402 VHGIGGIVGAIATGILVSPSLGGTGIYDYTTGAVAAYDMTAQVIAQLKAVGVTVVW-SGV 460

Query: 370 GFGLGKLVGGFTGGLRVTEEEEKMGLDLAEHKLPAY 405
           G  +   V     GLR + + E+ GLD+ EH   AY
Sbjct: 461 GTAVILFVISVIVGLRPSTDVEREGLDINEHGERAY 496