Pairwise Alignments

Query, 369 a.a., TIGR04013 family B12-binding domain/radical SAM domain-containing protein from Methanococcus maripaludis S2

Subject, 454 a.a., tRNA-i(6)A37 methylthiotransferase (EC 2.8.4.3) from Sphingobium sp. HT1-2

 Score = 59.3 bits (142), Expect = 2e-13
 Identities = 68/312 (21%), Positives = 135/312 (43%), Gaps = 33/312 (10%)

Query: 40  DILIYSFMSMQEKEVLSEINELKKLKKD-----VILIAGG-AHPSGCPEDTLNLGFDHVI 93
           D++I +   ++EK V    +++ +L ++     +I +AG  A   G          D V+
Sbjct: 54  DLVILNTCHIREKAVDKVYSDIGRLTREDGTRPMIAVAGCVAQAEGGEIQRRARNVDIVV 113

Query: 94  VGEGEISLPNLINSIKSGKTP---EKIIKGKPIENFDDYEKIWPLAPIEITRGCPYNCRF 150
             +    LP+LI   + G+     +     K        ++  P A + I  GC   C +
Sbjct: 114 GPQAYHRLPDLIGKAQRGEDAVDTDMPANSKFAALPGRTKQARPTAFLTIMEGCDKFCTY 173

Query: 151 CQTPQIFGKNIRHRSIESIVKIVKTM--GDIRFVT-----PNAFSYGSKTGTKPDIEKLE 203
           C  P   G  I  RS  +I+   + +  G +R +T      NA++     G    ++ L 
Sbjct: 174 CVVPYTRGAEIS-RSWTAILDEARALVDGGVREITLLGQNVNAWTGEDDKGRMQGMDGLA 232

Query: 204 KLMKSLFEIKKRLFFGTFPSEVRPEFVNFETLDLVNKYCDNR----YIHFGAQSGSDEVL 259
           + +  L  +++  +  + P+++           L+  + D      ++H   QSG+D +L
Sbjct: 233 RELAKLGGLERIRYTTSHPNDMSD--------GLIAAHGDEPKLMPFLHLPVQSGNDRIL 284

Query: 260 KHIRRGHLVSDVINAVETSKEC--DLIPKVDFIFGFPDETDDQRKESIDLMKYIIKKNGK 317
           K + R H V   +  +E  +E   D+    DFI GFP ETD + ++++ ++  +  +  +
Sbjct: 285 KAMNRSHTVDSYLRIIERVREARPDIALSGDFIVGFPGETDAEFEDTLKIVDQV--RYAQ 342

Query: 318 VHAHYFMPLCGT 329
            ++  + P  GT
Sbjct: 343 CYSFKYSPRPGT 354