Pairwise Alignments

Query, 369 a.a., TIGR04013 family B12-binding domain/radical SAM domain-containing protein from Methanococcus maripaludis S2

Subject, 474 a.a., hopanoid biosynthesis associated radical SAM protein HpnJ from Paraburkholderia sabiae LMG 24235

 Score = 51.2 bits (121), Expect = 6e-11
 Identities = 57/233 (24%), Positives = 97/233 (41%), Gaps = 14/233 (6%)

Query: 134 PLAPIEITRGCPYNCRFCQTPQ-IFGKNIRHRSIESIVKIVKTMGD-IRFVTPNAFSYGS 191
           P   I   RGC   C FC  PQ + G   R RS+E++++ VK + D +  V    F   +
Sbjct: 197 PYVSIYTGRGCRSRCTFCLWPQTVGGHRYRTRSVENVLEEVKWIRDNMPEVKEIMFDDDT 256

Query: 192 KTGTKPDIEKLEKLMKSLFEIKKRLFFGTFPSEVRPEFVNFETLDLVNKYCDNRYIHFGA 251
            T  KP +E++ + +  L         G   S      V + TL ++ K    R +  G 
Sbjct: 257 FTDFKPRVEEIARGLGKL---------GVTWSCNAKANVPYATLKIM-KENGLRLLLVGY 306

Query: 252 QSGSDEVLKHIRRGHLVSDVINAVETSKECDLIPKVDFIFGFPDETDDQRKESIDLMKYI 311
           +SG D++L +I++G          E  ++  +     FI G P ET +   ++I+  K I
Sbjct: 307 ESGDDQILLNIKKGLRTDIARRFSEDCRKLGIKIHGTFILGLPGETKETIAKTIEYAKDI 366

Query: 312 IKKNGKVHAHYFMPLCGTYFENSTPELLEKETLDILGKMAKKGQITGSWGYQY 364
                 +      P  GT       +    E   ++  ++K+G    + GY +
Sbjct: 367 --NPHTIQVSLAAPYPGTTLYKQAVDNGWLEENKVINLVSKEGVQLAAIGYPH 417