Pairwise Alignments

Query, 369 a.a., TIGR04013 family B12-binding domain/radical SAM domain-containing protein from Methanococcus maripaludis S2

Subject, 437 a.a., 30S ribosomal protein S12 methylthiotransferase RimO from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 48.9 bits (115), Expect = 3e-10
 Identities = 57/239 (23%), Positives = 100/239 (41%), Gaps = 33/239 (13%)

Query: 82  EDTLNLGFDHVIVGEGEISLPNLINSIKSGKTPEKIIKGKPIENFDDYEKIWPLAPIEIT 141
           +D+L      V    G + LP L+  +++    E I  G+ +     +      A  +I 
Sbjct: 96  KDSLEQEIPQVDAYFGTLELPQLLKKLEADYKHELI--GERLLTTPSH-----FAYFKIA 148

Query: 142 RGCPYNCRFCQTPQIFGKNIRHRSIESIVKIVKTMG-----DIRFVTPNAFSYGSKTGTK 196
            GC   C FC  P + GK++  R IE +V+  K +      ++  +  +   YG +   +
Sbjct: 149 EGCNRPCSFCAIPLMRGKHV-DRPIEDLVREAKRLAGMGTKELVLIAQDLTYYGLQHYGE 207

Query: 197 PDIEKLEKLMKSLFEI-------KKRLFFGTFPSEVRPEFVNFETLDLVNKYCDNRYIHF 249
               KL  L+++L ++        +  +   FP EV      F+ ++     C  +Y+  
Sbjct: 208 ---RKLADLLRNLSDVDGIEWIRMQYAYPSQFPMEV------FDVMNERENIC--KYLDM 256

Query: 250 GAQSGSDEVLKHIRRGHLVSDVINAVETSKE--CDLIPKVDFIFGFPDETDDQRKESID 306
             Q  SD +LK +RRG      I  V+  ++   D+  +   I G P ETD   +E  D
Sbjct: 257 PLQHISDNMLKTMRRGISKRRTIELVDQIRQRVPDIALRTTLIAGHPGETDQDFQELYD 315