Pairwise Alignments

Query, 369 a.a., TIGR04013 family B12-binding domain/radical SAM domain-containing protein from Methanococcus maripaludis S2

Subject, 438 a.a., B12-binding domain-containing radical SAM protein from Methanococcus maripaludis S2

 Score = 64.7 bits (156), Expect = 5e-15
 Identities = 93/376 (24%), Positives = 159/376 (42%), Gaps = 57/376 (15%)

Query: 14  VSKLYPLIGGTLFKEFGEIIENLDSLDILIYSFMSMQEKEVLSEINELKKLKKDVILIAG 73
           ++K   +     F E    I+N D+  ILI          V+  + ELK    + I IAG
Sbjct: 30  LNKYRDISANAYFIENYSKIKNSDA--ILITLQYENDYFNVVKIVKELKAQNPNAIFIAG 87

Query: 74  GAHPSGCPEDTLNLGFDHVIVGE--GEISLPNLINS--------IKSGKTPEKIIKGKPI 123
           G      P       FD  +VGE  G  ++  LIN         +      EKI +  P 
Sbjct: 88  GPCAISNPLPIQEF-FDVFVVGEIEGTDTMYQLINGNFEIPGVYVPKTYNNEKIKRIYPK 146

Query: 124 E-NFDDYEKIWPLAPI-------------EITRGCPYNCRFCQTPQIFGKNIRHRSIESI 169
           +   DDY    P++ +             EI RGC  NC+FC    I+    R+R IE +
Sbjct: 147 KLGIDDY----PISQVTHESGAYGKAYLLEIGRGCIRNCKFCMAKCIYAPP-RYRKIEDL 201

Query: 170 VKIVKTMGDIRFVTPNAFSYGSKTGTKPDIEKLEKLMKSLFEIKKRLFFGTFPSE----V 225
             +V                G K     D +K+  +  S+ + +  L      SE    +
Sbjct: 202 KHLVDE--------------GLKN---TDADKVSLIAPSVSDYRYVLDLCAHISEKNVSI 244

Query: 226 RPEFVNFETL-DLVNKYCDNRYIHFGAQSGSDEVLKHIRRGHLVSDVINAVETSKECDLI 284
            P  +  +T+ D + +Y + + +    ++GS+ + K I +G    +++NAV+ +K   + 
Sbjct: 245 SPSSLRADTITDELLEYLNLKTLTIAPEAGSEVLRKKIDKGITEENILNAVDIAKTHGIS 304

Query: 285 P-KVDFIFGFPDETDDQRKESIDLMKYIIKKNGKVHA--HYFMPLCGTYFENSTPELLEK 341
             K+ ++ GFPDET++  +E I+L K I     KV    +  +P   T FE+   ++  K
Sbjct: 305 TVKLYYMVGFPDETEEDIEEIINLTKKIKDNVRKVDVSINPMVPKPHTPFEDFEFDMDSK 364

Query: 342 ETLDILGKMAKKGQIT 357
             +  + K  +K +++
Sbjct: 365 TKIKYIEKSLRKIKVS 380