Pairwise Alignments

Query, 369 a.a., TIGR04013 family B12-binding domain/radical SAM domain-containing protein from Methanococcus maripaludis S2

Subject, 498 a.a., B12-binding domain-containing radical SAM protein from Magnetospirillum magneticum AMB-1

 Score = 52.8 bits (125), Expect = 2e-11
 Identities = 65/292 (22%), Positives = 115/292 (39%), Gaps = 55/292 (18%)

Query: 62  KKLKKDVILIAGGAHPSGCPEDTLNLG-FDHVIVGEGEISLPNLINSIKS----GKTPE- 115
           +K K  +  IA G HPS  P+ TL    F +V  GEG  +L  L+ ++KS    G  P  
Sbjct: 103 EKGKGRLATIALGTHPSALPKRTLEEEPFTYVCQGEGPYTLLELVRALKSDGDLGAVPGL 162

Query: 116 -------KIIKGKPIENFDDYEKIWP----------------------------LAPIEI 140
                  K+    P     D +   P                             A ++ 
Sbjct: 163 WYRDRDGKVRSNTPAPLISDLDAELPRQALDLLDMSLYRAHNWHCFGNLDSRDSYASLQT 222

Query: 141 TRGCPYNCRFCQTPQIFGKN-IRHRSIESIVKIVKTMGDIRFVTPNAFSYGSKTGTKPD- 198
           + GCP+ C FC     FG N IR  S ++++  +  M            YG +    PD 
Sbjct: 223 SLGCPFKCSFCCINAPFGVNKIRTWSPDNVIAQIDEM---------VLKYGVRNIKIPDE 273

Query: 199 --IEKLEKLMKSLFEIKKRLFFGTFPSEVRPEFVNFETLDLVNKYCDNRYIHFGAQSGSD 256
             +   + ++    ++ +R +     +  R + +N + +    K     ++  G +SGS 
Sbjct: 274 MFVLNPKHVLGICDKLIERGYGLNLWAYARVDTLNDDAMLDKLKAAGINWLGLGIESGSK 333

Query: 257 EVLKHIRRGHLVS-DVINAVETSKECDLIPKVDFIFGFPDETDDQRKESIDL 307
            V   + +G   + D+   V   ++  +    ++IFG PD+T +  +E++DL
Sbjct: 334 YVRDGVTKGRFGNLDISAVVRRVRDKGIYVGANYIFGLPDDTLESMQETLDL 385