Pairwise Alignments

Query, 369 a.a., TIGR04013 family B12-binding domain/radical SAM domain-containing protein from Methanococcus maripaludis S2

Subject, 477 a.a., (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB from Alteromonas macleodii MIT1002

 Score = 79.3 bits (194), Expect = 2e-19
 Identities = 74/318 (23%), Positives = 139/318 (43%), Gaps = 20/318 (6%)

Query: 10  NKYSVSKLYPLIGGTLFKEFGEIIENLDSLDILIYSFMSMQEKEVLSEINELKKLKKDV- 68
           N+Y   K+  L+  T      E  E  D + +   S     +++V  ++   K LK+D  
Sbjct: 15  NEYDSEKMADLLDSTHGYSAAESAEEADVILLNTCSIREKAQEKVFHQLGRWKTLKQDKP 74

Query: 69  -ILIAGGAHPSGCPEDTLN--LGFDHVIVGEGEIS-LPNLINSIKSGKTPEKIIKGKPIE 124
            ++I  G   +    DT+     F  ++ G   +  LP +IN ++ G      +    IE
Sbjct: 75  ELIIGVGGCVASQEGDTIRQRAPFVDLVFGPQTLHRLPEMINQLQGGAKSVIDVSFPEIE 134

Query: 125 NFD---DYEKIWPLAPIEITRGCPYNCRFCQTPQIFGKNIRHRSIESIVKIVKTMG---- 177
            FD   +     P A + I  GC   C FC  P   G+ +     + +++I +  G    
Sbjct: 135 KFDRLPEPRAEGPTAFVSIMEGCSKYCTFCVVPYTRGEEVSRPVDDVLLEIAQLAGQGVR 194

Query: 178 DIRFVTPNAFSYGSKT--GTKPDIEKLEKLMKSLFEIKKRLFFGTFPSEVRPEFVNFETL 235
           ++  +  N  +Y  +   GT     +L +L+ ++  I +  +  + P E   + +  E  
Sbjct: 195 EVNLLGQNVNAYRGENYDGTICRFSELLELVAAIDGIDRIRYTTSHPVEFTDDII--EAY 252

Query: 236 DLVNKYCDNRYIHFGAQSGSDEVLKHIRRGHLVSDVINAVETSKEC--DLIPKVDFIFGF 293
             + +  D  ++H   QSGSD +L  ++RGH   +  + +   K+   ++    DFI GF
Sbjct: 253 ASIPELVD--HLHLPVQSGSDRILNLMKRGHTAIEYKSKMRKLKKIRPNISLSSDFIIGF 310

Query: 294 PDETDDQRKESIDLMKYI 311
           P ETD   + ++DL++ +
Sbjct: 311 PGETDADFEATMDLIQAV 328