Pairwise Alignments

Query, 369 a.a., TIGR04013 family B12-binding domain/radical SAM domain-containing protein from Methanococcus maripaludis S2

Subject, 455 a.a., miaB protein from Agrobacterium fabrum C58

 Score = 58.9 bits (141), Expect = 3e-13
 Identities = 74/311 (23%), Positives = 127/311 (40%), Gaps = 43/311 (13%)

Query: 34  ENLDSLDILIYSFMSMQEK---EVLSEINELKKLKKD--------VILIAGGAHPSGCPE 82
           E++   D+++ +   ++EK   +V S +  L+ +KK         +I +AG    +   E
Sbjct: 42  EDMGEADLVLLNTCHIREKAAEKVYSALGRLRDMKKSREEQGREFMIGVAGCVAQAEGEE 101

Query: 83  DTLNLGFDHVIVGEGEIS-LPNLINSIKSGKT---PEKIIKGK----PIENFDDYEKIWP 134
                    V++G      LP+ +  ++ G+     E  ++ K    P+           
Sbjct: 102 ILRRAPAVDVVIGPQTYHRLPDALKRVRRGERVIETEYAVEDKFEHLPVAEKATLRSRGV 161

Query: 135 LAPIEITRGCPYNCRFCQTPQIFGKNIRHRSIESIVKIVKTMGD--IRFVTPNAFSYGSK 192
            A + +  GC   C FC  P   G  +  R +  IV     + D  +R +T    +  + 
Sbjct: 162 TAFLTVQEGCDKFCTFCVVPYTRGSEVS-RPVRQIVDEAMKLVDAGVREITLLGQNVNAW 220

Query: 193 TGTKPDIEK--LEKLMKSLFEIKKRLFFGTFPSEVRPEFVNFETLD----LVNKYCDNR- 245
            G  P  EK  L +L+  L EI         P   R  +      D    L+  + D R 
Sbjct: 221 QGEGPKGEKWGLAELLYRLAEI---------PGLARLRYTTSHPRDMDDRLIGAHRDLRI 271

Query: 246 ---YIHFGAQSGSDEVLKHIRRGHLVSDVINAVE--TSKECDLIPKVDFIFGFPDETDDQ 300
              Y+H   QSGSD +LK + R H   + I  +E   S   D+    DFI GFP ETD  
Sbjct: 272 LMPYLHLPVQSGSDRILKAMNRRHTGEEYIQLIEKIRSARPDIAMSGDFIVGFPGETDRD 331

Query: 301 RKESIDLMKYI 311
            ++++ +++ +
Sbjct: 332 FEDTMAMVETV 342