Pairwise Alignments

Query, 369 a.a., TIGR04013 family B12-binding domain/radical SAM domain-containing protein from Methanococcus maripaludis S2

Subject, 485 a.a., tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase from Acinetobacter radioresistens SK82

 Score = 66.2 bits (160), Expect = 2e-15
 Identities = 93/383 (24%), Positives = 161/383 (42%), Gaps = 52/383 (13%)

Query: 10  NKYSVSKLYPLIGGTLFKEFGEII-ENLDSLDILIYSFMSMQEK---EVLSEINELKKLK 65
           N+Y   ++  L+G +     G I+  N    DIL+ +  S++EK   +V SE+   +KLK
Sbjct: 45  NEYDSHRMADLLGDS----HGYILTSNPADADILLMNTCSIREKAQEKVFSELGRWRKLK 100

Query: 66  K---DVILIAGGAHPSGCPEDTLNLG--FDHVIVGEGEISLPNLINSIKSGKTPEKIIKG 120
               D+++  GG   S   ++        D V   +    LP +++         K  K 
Sbjct: 101 DQNPDLVIGVGGCVASQEGDNIQKRAPYVDMVFGPQTLHRLPQMLDQHIDQLEKPKKEKI 160

Query: 121 KPIE-NFDDYEKIWPL---------APIEITRGCPYNCRFCQTPQIFGKNIRHRSIESIV 170
           K ++ +F D EK   L         A + I  GC   C FC  P   G+ +     + + 
Sbjct: 161 KLVDISFPDIEKFDFLPEPRVEGYKAFVSIMEGCSKYCSFCVVPYTRGEEVSRPLDDVLA 220

Query: 171 KIV----KTMGDIRFVTPNAFSYGSKT--GTKPDIEKLEKLMKSLFEIKKRLFFGTFPSE 224
           +I     K + +I  +  N   Y  +T  GT      L +L+  +  I +  +  + P E
Sbjct: 221 EIAGLAEKGVREINLLGQNVNGYRGETFEGTICTFADLLRLVAEIPGIGRVRYTTSHPLE 280

Query: 225 VRPEFVNFETLDLVNKYCDN----RYIHFGAQSGSDEVLKHIRRGHLVSDVINAVETSKE 280
                      DL+  Y D      ++H   QSGS++VL+ ++R H +   I  +   ++
Sbjct: 281 FND--------DLIQCYRDLPQMVSHLHLPVQSGSNDVLQAMKRNHTIDVYIEKIAKLRK 332

Query: 281 C--DLIPKVDFIFGFPDETDDQRKESIDLMKYIIKKNGKVHAHYFM-----PLCGTYFEN 333
              D+    DFI GFP ETD   +E+       I++    H++ F+         +   +
Sbjct: 333 VRPDMHLSSDFIIGFPGETDQNFEETYQ----FIQEMDFDHSYSFIYSKRPGTPASELAD 388

Query: 334 STPELLEKETLDILGKMAKKGQI 356
            TPE ++KE L  + +  K+  I
Sbjct: 389 DTPEEVKKERLARVQQWIKQSSI 411