Pairwise Alignments

Query, 317 a.a., polyprenyl synthetase family protein from Methanococcus maripaludis S2

Subject, 335 a.a., Octaprenyl diphosphate synthase from Xanthobacter sp. DMC5

 Score =  145 bits (365), Expect = 2e-39
 Identities = 98/294 (33%), Positives = 147/294 (50%), Gaps = 10/294 (3%)

Query: 29  SKHLLLAGGKRVRPYLSILTYLLKKDELTEIMAPALSVELIHNYTLVHDDIMDNDDQRRG 88
           + HL+ +GGKR+RP L++    L        +  A SVE +H  TL+HDD++D  D RRG
Sbjct: 47  ANHLISSGGKRLRPMLTLACAALAGYRGEGHVKLAASVEFMHTATLLHDDVVDESDMRRG 106

Query: 89  IPTVHTVYGEPIAILAGDLLYAKAFEALSNIEDSNKAHEVLKVLSKACVEVCEGQTEDME 148
                 ++G   ++L GD L  +AF+ +  +         L +LS A   + EG+   + 
Sbjct: 107 KLAARKLWGNEASVLVGDFLLGQAFKMMVEVGSMT----CLDILSTAACVIAEGEVMQLA 162

Query: 149 FEERFPTL-DEYLEMISKKTGALIVAPVEIGAVMADCTPEEREALCNYAKRIGMTFQIQD 207
             +   T  D+YL +I  KT  L  A  E+GAV+A     E+ A  +Y   +G+ FQ+ D
Sbjct: 163 AAKNTATSEDDYLAVIRGKTAELFAAACEVGAVLAQRPKAEQAACRSYGMNLGIAFQLVD 222

Query: 208 DVLDLIGDQKTIGKPVGSDIVEGKKTMMVIHAMENLSEDKKERLLQILGNQDANQQEVAE 267
           D LD  G Q  +GK VG D  EGK T+ V+ A     E ++    + L N +A+  ++ +
Sbjct: 223 DALDYGGSQAKLGKNVGDDFREGKITLPVLLAFRRGDEKERAFWQRCLENSEASDADLDQ 282

Query: 268 AIELLADSINYAKDTMKNATEE---AKDYLKIFDAEKRK-NLENIADFIIERIH 317
           AI L+      A DT++ A      AKD L +F A   K  L    DF + R H
Sbjct: 283 AIGLMTKHRAIA-DTVERARHYGAIAKDALALFPAGPAKAALMEAVDFCLSRAH 335