Pairwise Alignments

Query, 317 a.a., polyprenyl synthetase family protein from Methanococcus maripaludis S2

Subject, 344 a.a., Farnesyl diphosphate synthase from Xanthobacter sp. DMC5

 Score =  134 bits (338), Expect = 2e-36
 Identities = 89/239 (37%), Positives = 123/239 (51%), Gaps = 16/239 (6%)

Query: 12  DSELKKYMEKDTKLYGASKHLLLAGGKRVRPYLSILTYLLKKDELTEIMAPALSVELIHN 71
           D+ L     +  +L GA +H  L GGKR+RP+L I    L        +  A ++E +H 
Sbjct: 62  DAALPGERLRPERLMGAMRHGALGGGKRLRPFLVIEGAALFGLTAEAAVTAATAIECVHC 121

Query: 72  YTLVHDDI--MDNDDQRRGIPTVHTVYGEPIAILAGDLLYAKAFEALSNIEDSNKAHEVL 129
           Y+LVHDD+  MD+DD RRG PTVH  Y E  AILAGD L   AF+ L+  ED++    V 
Sbjct: 122 YSLVHDDLPAMDDDDLRRGRPTVHKAYDEATAILAGDGLLTLAFDLLAG-EDAHPDPAVR 180

Query: 130 KVLSKACVEVCE------GQTEDMEFEERFPT-------LDEYLEMISKKTGALIVAPVE 176
             L +A            GQ  D+  E RF          D   ++ + KTGAL+    E
Sbjct: 181 IALVRALARAAGIGGMVGGQMLDLAAEGRFSGGTPLAHGEDAIRDLQAMKTGALLAVSAE 240

Query: 177 IGAVMADCTPEEREALCNYAKRIGMTFQIQDDVLDLIGDQKTIGKPVGSDIVEGKKTMM 235
            GA++      +R AL  Y + +G  FQI DD+LD+ G  + +GK VG D   GK T++
Sbjct: 241 AGALLGGADAGQRAALLAYGRALGAAFQIADDILDVEGTAEEVGKKVGKDAAAGKATLV 299