Pairwise Alignments

Query, 317 a.a., polyprenyl synthetase family protein from Methanococcus maripaludis S2

Subject, 322 a.a., octaprenyl-diphosphate synthase from Pseudomonas simiae WCS417

 Score =  146 bits (369), Expect = 6e-40
 Identities = 92/312 (29%), Positives = 154/312 (49%), Gaps = 7/312 (2%)

Query: 9   SKIDSELKKYMEKDTKLYGA-SKHLLLAGGKRVRPYLSILTYLLKKDELTEIMAPALSVE 67
           S +D  +KK +     L      ++  AGGKR+RP L +L       E  ++   A ++E
Sbjct: 15  SAVDGIIKKQLTSKVPLVSKIGDYITSAGGKRLRPLLVLLCGKALGREGDDLRLLAATIE 74

Query: 68  LIHNYTLVHDDIMDNDDQRRGIPTVHTVYGEPIAILAGDLLYAKAFEALSNIEDSNKAHE 127
            +H  TL+HDD++D    RRG  T + ++G   ++L GD LY+++FE +  +        
Sbjct: 75  FLHTATLLHDDVVDMSGMRRGRETANAMWGNAPSVLVGDFLYSRSFEMMVELGSM----P 130

Query: 128 VLKVLSKACVEVCEGQTEDMEFEERFPTLDE-YLEMISKKTGALIVAPVEIGAVMADCTP 186
           V+K+LS+A   + EG+   +       T +E Y+E+I  KT  L  A     A +   T 
Sbjct: 131 VMKILSQATRIIAEGEVLQLSKVRDASTTEETYMEVIRGKTAMLFEASTHSAAALCGATA 190

Query: 187 EEREALCNYAKRIGMTFQIQDDVLDLIGDQKTIGKPVGSDIVEGKKTMMVIHAMENLSED 246
           E+ EAL  +   +G+ FQ+ DD+LD  GD +T+GK VG D+ EGK T+ +I+ M   + +
Sbjct: 191 EQAEALRTFGDHLGVAFQLVDDLLDYKGDAETLGKNVGDDLAEGKPTLPLIYTMREGTPE 250

Query: 247 KKERLLQILGNQDANQQEVAEAIELLADSINYAKDTMKNATEEAKDYLKIFDA-EKRKNL 305
           +   + + +        E   A    + S+ Y     ++    A   L+   A E R  L
Sbjct: 251 QAALVRKAIQKGGIEDLEAIRAAVEASGSLEYTAQLARDYVARAIQCLEALPASEYRDAL 310

Query: 306 ENIADFIIERIH 317
             +++F + R H
Sbjct: 311 VELSEFAVARTH 322