Pairwise Alignments

Query, 317 a.a., polyprenyl synthetase family protein from Methanococcus maripaludis S2

Subject, 301 a.a., (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) from Sphingobium sp. HT1-2

 Score =  144 bits (364), Expect = 2e-39
 Identities = 97/260 (37%), Positives = 139/260 (53%), Gaps = 8/260 (3%)

Query: 24  KLYGASKHLLLAGGKRVRPYLSILTYLLKKDELTEIMAPALSVELIHNYTLVHDDI--MD 81
           +LY A +H  + GGKR+RP L   T  L        +   L++E IH Y+LVHDD+  MD
Sbjct: 38  RLYEAMRHAAIGGGKRLRPLLVQATCDLFNISRESALRVGLAIECIHVYSLVHDDLPAMD 97

Query: 82  NDDQRRGIPTVHTVYGEPIAILAGDLLYAKAFEALSNIEDSNKAH---EVLKVLSKAC-- 136
           NDD RRG PTVH  + E  AILAGD L+  AFE L++ +    A    +++K L+ A   
Sbjct: 98  NDDMRRGKPTVHKAFDEATAILAGDCLHDLAFEILADEQTHPDAFVRIDLVKALAVASGP 157

Query: 137 VEVCEGQTEDMEFEERFPTLDEYLEMISKKTGALIVAPVEIGAVMADCTPEEREALCNYA 196
             +  GQ  D+E E+    L     + + KTGALI   V+  A+MA    E R  L  YA
Sbjct: 158 AGMAGGQMMDLEAEKTRFDLATVTRLQNLKTGALIGFCVDAAAIMARIPVEARTGLHGYA 217

Query: 197 KRIGMTFQIQDDVLDLIGDQKTIGKPVGSDIVEGKKTMMVIHAMENLSEDKKERLLQILG 256
           + IG+ FQI DD+LD+ GD    GK +G D   GK+T + +  ++   E  +  + Q   
Sbjct: 218 RDIGLAFQIADDLLDVEGDAALAGKALGKDAAAGKETFVSLLGVDRAREQGRLLVEQAKA 277

Query: 257 NQDANQQEVAEAIELLADSI 276
           +   +  E A+ +  +AD I
Sbjct: 278 HLHGHGAE-ADLLRAIADYI 296