Pairwise Alignments

Query, 317 a.a., polyprenyl synthetase family protein from Methanococcus maripaludis S2

Subject, 296 a.a., Farnesyl diphosphate synthase from Methylophilus sp. DMC18

 Score =  131 bits (330), Expect = 2e-35
 Identities = 89/245 (36%), Positives = 135/245 (55%), Gaps = 9/245 (3%)

Query: 24  KLYGASKHLLLAGGKRVRPYLSILTYLLKKDELTEIMAPALSVELIHNYTLVHDDI--MD 81
           +L+ A ++ +L GGKRVR  LS     L         A A +VELIH ++LVHDD+  MD
Sbjct: 36  RLHQAMRYSVLGGGKRVRALLSYAAAELAGTSRITADASAAAVELIHAFSLVHDDMPCMD 95

Query: 82  NDDQRRGIPTVHTVYGEPIAILAGDLLYAKAFEALSNIEDSNKAHEVLKVLSKACVE--V 139
           +DD RRG P+ H  Y +  A+L GD L + AFE ++  + + +A + ++VL++A     +
Sbjct: 96  DDDLRRGKPSCHKQYDDATALLVGDALQSLAFECIAETQ-APQALKQVQVLAQATGSRGM 154

Query: 140 CEGQTEDMEFEERFPTLDEYLEMISKKTGALIVAPVEIGAVMA-DCTPEEREALCNYAKR 198
           C GQ+ D++   +  T  E   M   KTGALI A   +GA  A D  P   + L  Y+++
Sbjct: 155 CGGQSIDLQSTGKRLTRAELETMHQYKTGALIRAATLLGAYAAPDTAPALIQCLEQYSQK 214

Query: 199 IGMTFQIQDDVLDLIGDQKTIGKPVGSDIVEGKKTMMVIHAME---NLSEDKKERLLQIL 255
           +G+ FQ+ DD+LD   D +T+GK  G D ++ K T + +  +E    L E      LQ+L
Sbjct: 215 MGLAFQVVDDILDATADTQTLGKTAGKDALQDKSTYVSLLGLEEAKTLVEALYAEALQLL 274

Query: 256 GNQDA 260
               A
Sbjct: 275 AGYGA 279