Pairwise Alignments

Query, 317 a.a., polyprenyl synthetase family protein from Methanococcus maripaludis S2

Subject, 299 a.a., (2E,6E)-farnesyl diphosphate synthase from Erwinia tracheiphila SCR3

 Score =  145 bits (366), Expect = 1e-39
 Identities = 100/269 (37%), Positives = 148/269 (55%), Gaps = 21/269 (7%)

Query: 21  KDTKLYGASKHLLLAGGKRVRPYLSILTYLLKKDELTEIMAPALSVELIHNYTLVHDDI- 79
           + + L  A ++  L GGKR+RP+L   T  +   + + + APA +VE IH Y+L+HDD+ 
Sbjct: 28  QSSPLVNAMEYSALLGGKRLRPFLVYATGEMLGADSSALDAPAAAVECIHAYSLIHDDLP 87

Query: 80  -MDNDDQRRGIPTVHTVYGEPIAILAGDLLYAKAFEALSN-----IEDSNKAHEVLKVLS 133
            MD+D+ RRG PT H  +GE  AILAGD L   AF  L++     +  S +   + ++  
Sbjct: 88  AMDDDNLRRGQPTCHIKFGEDTAILAGDALQTLAFTILADAPMQGVTPSERIAMISELAQ 147

Query: 134 KACVE-VCEGQTEDMEFEERFPTLDEYLEMISKKTGALIVAPVEIGAVMADCTPEER-EA 191
            + V  +C GQ  D++ E +  +LD   ++   KTGALI A V +GA+ A     E   A
Sbjct: 148 ASGVAGMCGGQALDLDAEYQQVSLDTLEQIHRHKTGALIRAAVRLGALAAGSRGREAISA 207

Query: 192 LCNYAKRIGMTFQIQDDVLDLIGDQKTIGKPVGSDIVEGKKTMMVIHAMENLSEDKKERL 251
           L  YA  IG+ FQ+QDD+LD++GD   IGK  G+D   GK T   +  +    E+ + + 
Sbjct: 208 LDRYANAIGLAFQVQDDILDVVGDTDIIGKRQGADQQLGKSTYPALLGL----EEARAKA 263

Query: 252 LQILGNQDANQQEVAEAIELLA-DSINYA 279
           L +       QQE   A+E LA  S+N A
Sbjct: 264 LDL-------QQEALSALETLAVQSLNTA 285