Pairwise Alignments

Query, 317 a.a., polyprenyl synthetase family protein from Methanococcus maripaludis S2

Subject, 299 a.a., (2E,6E)-farnesyl diphosphate synthase from Escherichia coli ECRC62

 Score =  152 bits (384), Expect = 1e-41
 Identities = 104/271 (38%), Positives = 148/271 (54%), Gaps = 26/271 (9%)

Query: 22  DTKLYGASKHLLLAGGKRVRPYLSILTYLLKKDELTEIMAPALSVELIHNYTLVHDDI-- 79
           +T  YGA     L GGKR+RP+L   T  +       + APA +VE IH Y+L+HDD+  
Sbjct: 34  ETMQYGA-----LLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLPA 88

Query: 80  MDNDDQRRGIPTVHTVYGEPIAILAGDLLYAKAFEALSN-----IEDSNKAHEVLKVLSK 134
           MD+DD RRG+PT H  +GE  AILAGD L   AF  LS+     + D ++   + ++ S 
Sbjct: 89  MDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDANMPEVSDRDRISMISELASA 148

Query: 135 ACVE-VCEGQTEDMEFEERFPTLDEYLEMISKKTGALIVAPVEIGAVMA-DCTPEEREAL 192
           + +  +C GQ  D++ E +   LD    +   KTGALI A V +GA+ A D        L
Sbjct: 149 SGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGALSAGDKGRRALPVL 208

Query: 193 CNYAKRIGMTFQIQDDVLDLIGDQKTIGKPVGSDIVEGKKTMMVIHAME-------NLSE 245
             YA+ IG+ FQ+QDD+LD++GD  T+GK  G+D   GK T   +  +E       +L +
Sbjct: 209 DKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARKKARDLID 268

Query: 246 DKKERLLQILGNQDANQQEVAEAIELLADSI 276
           D ++ L Q+     A Q     A+E LAD I
Sbjct: 269 DARQSLKQL-----AEQSLDTSALEALADYI 294