Pairwise Alignments

Query, 317 a.a., polyprenyl synthetase family protein from Methanococcus maripaludis S2

Subject, 323 a.a., octaprenyl diphosphate synthase from Escherichia coli ECRC62

 Score =  147 bits (371), Expect = 3e-40
 Identities = 88/313 (28%), Positives = 168/313 (53%), Gaps = 10/313 (3%)

Query: 8   LSKIDSELKKYMEKDTKLYGASKHLLLAGG-KRVRPYLSILTYLLKKDELTEIMAPALSV 66
           ++ +++ + + +  D +L     + +++GG KR+RP +++L       E    +  A  +
Sbjct: 14  MAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYEGNAHVTIAALI 73

Query: 67  ELIHNYTLVHDDIMDNDDQRRGIPTVHTVYGEPIAILAGDLLYAKAFEALSNIEDSNKAH 126
           E IH  TL+HDD++D  D RRG  T +  +G   ++L GD +Y +AF+ ++++       
Sbjct: 74  EFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTSLGSL---- 129

Query: 127 EVLKVLSKACVEVCEGQT-EDMEFEERFPTLDEYLEMISKKTGALIVAPVEIGAVMADCT 185
           +VL+V+S+A   + EG+  + M   +   T + Y+ +I  KT  L  A  +   ++A CT
Sbjct: 130 KVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCSGILAGCT 189

Query: 186 PEEREALCNYAKRIGMTFQIQDDVLDLIGDQKTIGKPVGSDIVEGKKTMMVIHAMENLSE 245
           PEE + L +Y + +G  FQ+ DD+LD   D + +GK VG D+ EGK T+ ++HAM + + 
Sbjct: 190 PEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLHAMHHGTP 249

Query: 246 DKKERLLQIL--GNQDANQQEVAEAIELLADSINYAKDTMKNATEEAKDYLKIF-DAEKR 302
           ++ + +   +  GN     + V EA+     S+ + +   +   ++A   L++  D   R
Sbjct: 250 EQAQMIRTAIEQGNGRHLLEPVLEAMN-ACGSLEWTRQRAEEEADKAIAALQVLPDTPWR 308

Query: 303 KNLENIADFIIER 315
           + L  +A   ++R
Sbjct: 309 EALIGLAHIAVQR 321