Pairwise Alignments

Query, 317 a.a., polyprenyl synthetase family protein from Methanococcus maripaludis S2

Subject, 296 a.a., Farnesyl diphosphate synthase from Alteromonas macleodii MIT1002

 Score =  150 bits (380), Expect = 3e-41
 Identities = 109/285 (38%), Positives = 159/285 (55%), Gaps = 24/285 (8%)

Query: 4   DREILSKIDSELKKYMEKDTKLYGASKHLLLAGGKRVRPYL-SILTYLL---KKDELTEI 59
           D  +L+ ID EL  Y  +   L  A +H LLAGGKR+RP L  ++   L   KKD+    
Sbjct: 15  DASLLTLID-ELPDYAPR---LKDAMRHALLAGGKRMRPLLVQVVGNTLDVPKKDQ---- 66

Query: 60  MAPALSVELIHNYTLVHDDI--MDNDDQRRGIPTVHTVYGEPIAILAGDLLYAKAFEALS 117
           MA ++++E +H Y+LVHDD+  MD+DD RRG+PT H  + E  AILAGD L A AF  L+
Sbjct: 67  MAISMAIECVHAYSLVHDDLPAMDDDDLRRGMPTCHIAFDEATAILAGDALQALAFTVLA 126

Query: 118 NIEDSN----KAHEVLKVLSKAC--VEVCEGQTEDMEFEERFPTLDEYLEMISKKTGALI 171
           +   S     K  ++L VL+K+   + +C GQ  D+    +  +L+E  ++   KTGAL+
Sbjct: 127 DAPLSTYAETKRSQLLSVLAKSAGYIGMCGGQAIDLASTGKTISLEELKQLHRLKTGALL 186

Query: 172 VAPVEIGAVMAD-CTPEEREALCNYAKRIGMTFQIQDDVLDLIGDQKTIGKPVGSDIVEG 230
            A VE+ A++++   P+ +  L  YA  IG+ FQ+QDD+LD+ G  + +GKP GSD   G
Sbjct: 187 KACVEMVAIVSEGLLPQTKIDLMAYAADIGLAFQVQDDILDVEGSSEKLGKPAGSDEALG 246

Query: 231 KKTM---MVIHAMENLSEDKKERLLQILGNQDANQQEVAEAIELL 272
           K T    + I   +   E   +  LQ L     N   +    ELL
Sbjct: 247 KNTFPAKLGITGAKQELEMLHDNALQALARLPYNTDSLIAFSELL 291