Pairwise Alignments

Query, 448 a.a., RNase J family beta-CASP ribonuclease from Methanococcus maripaludis S2

Subject, 555 a.a., metal dependent hydrolase from Agrobacterium fabrum C58

 Score =  164 bits (415), Expect = 7e-45
 Identities = 122/450 (27%), Positives = 223/450 (49%), Gaps = 40/450 (8%)

Query: 2   QLEVVAIGGYEEVGRNMTAVNIDGEIIIFDMGVRLDRIMIHEDTDISKMH-SLNLIEMGV 60
           +L  V +GG  E+G N+          ++  G    R  I  D  ++     L  +++ V
Sbjct: 6   ELVFVPLGGVGEIGMNLA---------LYGYGPESKRQWIMVDCGVTFAGPDLPGVDL-V 55

Query: 61  IPDDTVMKNIEGEVKAIVLTHGHLDHIGAITKLAHRYNAPIIGTPYTLELVKREILSEKK 120
           +PD + +   +  +K I++TH H DH GA+  L    N P+  +P+T  +++ +   E  
Sbjct: 56  LPDISYIAEQKKNLKGIIITHAHEDHYGAMNDLWPGLNVPVYASPFTAGMLEAKRAYEGT 115

Query: 121 FDVRNPLITLENGNKLDLTANITLEFVKITHSIPDAAMAVLHTPYGAVVYGNDFKFDNFP 180
                P+   + G+++++     +E V + HSIP+    ++ TP G V++  D+K D  P
Sbjct: 116 -RAEIPVTIFKAGDRINV-GPFEIEAVGVNHSIPEPMSLIIRTPLGNVIHTGDWKIDEAP 173

Query: 181 VVGEKPDYKALKRIGKQGVIAMVSESTRVDFEGKTASEGVAANLLKNDLLGTDNEDNAVV 240
            +G   D    + IG++GV+A++ +ST    +G + SE   +  L+  +   ++ +  V 
Sbjct: 174 SLGPLTDEARFRAIGEEGVLALMCDSTNALRDGVSPSEHEVSEGLRQII---ESAEGRVA 230

Query: 241 VTTFSSHIARIKSITDIASKMGRIPVLVGRSMSKYCGIAQDIGLVKFPKETKICWDPSSI 300
           VTTFSS++ RI+SI   A   GR  +L+G S+ +   ++QD+G+++  K       P   
Sbjct: 231 VTTFSSNVGRIRSIAQAAEAAGREVLLLGSSLKRVVNVSQDLGIMEGIK-------PFLA 283

Query: 301 DKTFHQIMKDGKENYLMVVTGHQGEEGAVLSRMATNK-TPFRFEKYDQVVFSADVIPNPM 359
           +  +  I +D     ++++TG QGE  A L++++ ++         D VVFS+  IP   
Sbjct: 284 EDEYGYIPRD---RVVVILTGSQGEPRAALAKLSRDEMRNVALASGDTVVFSSRAIP--- 337

Query: 360 NAAQRYLLEARLNL--AGVRLFKG----AHVSGHAAKEDHRDILRWLQPEHLIPAHGDFN 413
              ++ ++E +  L   GV +        HVSGH  + +   +  W +P+ L+P HG+  
Sbjct: 338 -GNEKAIIEIKNGLIEQGVHIVTDNEALVHVSGHPRRNELLRMYEWTKPQILVPVHGEAA 396

Query: 414 LTSAYAKLAEEEGFRLGEDVHLLRNGQSLK 443
              A  +LAE+ G      V  +RNG  L+
Sbjct: 397 HLVAQKELAEQAGI---SQVPKVRNGNVLR 423