Pairwise Alignments

Query, 549 a.a., Flp pilus assembly complex ATPase component TadA from Methanococcus maripaludis S2

Subject, 422 a.a., hypothetical protein from Pseudomonas sp. DMC3

 Score =  210 bits (535), Expect = 8e-59
 Identities = 141/368 (38%), Positives = 208/368 (56%), Gaps = 27/368 (7%)

Query: 122 LSESTLQKLGQ-IQGYLKNYSEKNNLHLRDIEILHLSHYFYLIIGKLGLLEIPLNDSKLE 180
           L E + Q+L Q +   +  Y  + +L +   E+  L       +   G LE+ L D  + 
Sbjct: 42  LLEGSRQQLAQFVTDKVAEYIARLHLAISRYEMERLGEEIVDELTGFGPLEVLLRDPSVT 101

Query: 181 EVMVNGVESPSFVF-HRKYQMCETNIR-LDRHEATRVVESIAYLAGRTIDSRTPMLDAFL 238
           E++VNG   P  VF  R   + ++++R +D H   RV++ I    GR +D  +PM+DA L
Sbjct: 102 EILVNG---PHRVFIERDGVLHQSDLRFIDAHHVERVMQRILAPLGRRLDESSPMVDARL 158

Query: 239 PDGSRVNATMSDVTLGGNTITIRKFSEDPLTIVDLINFGTFDLELAAFLWQAVEGYFGAK 298
           PDGSRVNA +  + L G  ++IRKF +D L   DL+   T DL +  FL  AV      +
Sbjct: 159 PDGSRVNAIIPPIALDGPCLSIRKFRKDMLKSTDLMAMQTIDLAIFEFLQNAV-----GR 213

Query: 299 PANTLIVGGTGSGKTTTLNVVSMFSMYTDRLVTIEDTPELQVPLTHLIKMITRPGRPGIQ 358
             N LI GGTG+GKTT LN++S      +RLVTIED  ELQ+   H++++ TRP  P  +
Sbjct: 214 RCNILISGGTGTGKTTLLNILSQLINPHERLVTIEDVAELQLGHPHVVRLETRP--PNAE 271

Query: 359 GY-EITMDDLIKNSLRMRPDRIFVGEVRGSEAHSLLVAMNTGHDGCSGTLHANSADEALI 417
           G+ E+   DLI+N+LRMRPDRI +GE+RG E   +L AMNTGHDG   T+HAN+A +AL+
Sbjct: 272 GHGEVKASDLIRNALRMRPDRIILGEIRGVEVVDVLTAMNTGHDGSMSTVHANNAQDALL 331

Query: 418 RLIN---------PPMNVPKVMMSSVDFIINQQRIKRNKKTVRRILGVVEIGGSGENITK 468
           RL               + +++ +++D II   R+   ++ V     VVE+ G  E++  
Sbjct: 332 RLETLVGLTGRSIAERTLRQMICAALDVIIQLTRMPDGRRCVSE---VVEVVGIREDVYV 388

Query: 469 TE-LFKYD 475
           T  LF+ D
Sbjct: 389 TNTLFRLD 396