Pairwise Alignments

Query, 549 a.a., Flp pilus assembly complex ATPase component TadA from Methanococcus maripaludis S2

Subject, 336 a.a., type IV secretion protein AvhB11 from Agrobacterium fabrum C58

 Score =  102 bits (254), Expect = 2e-26
 Identities = 91/313 (29%), Positives = 141/313 (45%), Gaps = 53/313 (16%)

Query: 174 LNDSKLEEVMVNG-----VESPSFVFHRKYQMCETNIRLDRHEATRVVESIAYLAGRTID 228
           L D  L EV+VN       E P     R Y+M E    L   +  R+  ++A  + ++ID
Sbjct: 21  LQDKSLLEVIVNRPGQVLTEGPGG--WRTYEMPE----LTFEKLMRLARAVASFSHQSID 74

Query: 229 SRTPMLDAFLPDGSRVNATMSDVTLGGN-TITIRKFSEDPLTIVDLINFGTFDLELAA-- 285
              P+L A LP   R+   +   T+    ++TIRK S    ++ DL   G F    AA  
Sbjct: 75  ETRPILSATLPGNERIQIVIPPATINDTVSMTIRKPSSVDFSLDDLEEKGFFQTACAATS 134

Query: 286 ---------------------FLWQAVEGYFGAKPANTLIVGGTGSGKTTTLNVVSMFSM 324
                                FL QAV         N +I G TGS KTT    +     
Sbjct: 135 TSSSAQDEELCETYRAGRFKDFLRQAV-----IARKNIIISGATGSAKTTLSKALIKHIP 189

Query: 325 YTDRLVTIEDTPELQVPLTHLIKMITRPGRPGIQGYEITMDDLIKNSLRMRPDRIFVGEV 384
             +R+++IEDTPEL +   + +++    GR G+        +L+++ LRMRPDRI + E+
Sbjct: 190 ENERVISIEDTPELVISQPNHVRLFYSKGRQGLS--RAGPKELLESCLRMRPDRILLQEL 247

Query: 385 RGSEAHSLLVAMNTGHDGCSGTLHANSAD---EALIRLINPP--------MNVPKVMMSS 433
           R   A   +  +N+GH G   T+HANSA+   E L+ L+            ++  ++ +S
Sbjct: 248 RDGTAFYYIRNVNSGHPGSITTVHANSAELAFEQLVLLVKESEGVAGLDRADIVALLKAS 307

Query: 434 VDFIINQQRIKRN 446
           +D +   +R K N
Sbjct: 308 IDIVAQCRRNKGN 320