Pairwise Alignments

Query, 335 a.a., potassium channel protein from Methanococcus maripaludis S2

Subject, 306 a.a., Potassium voltage-gated channel subfamily KQT; possible potassium channel, VIC family from Variovorax sp. SCN45

 Score = 46.2 bits (108), Expect = 1e-09
 Identities = 28/86 (32%), Positives = 54/86 (62%), Gaps = 12/86 (13%)

Query: 3   SMEKIKIGI-FVLFVVIISFSLMFMYIEG-----WTLLQAIYFSVATISTVGYGDFYPTS 56
           S  KI + + FV+ VV++  +LM++ +EG      ++  AIY++++T++TVG+GD  P +
Sbjct: 166 SRRKITVFVGFVMLVVLVMGTLMYV-VEGPEHGFTSIPVAIYWAISTMATVGFGDLVPKT 224

Query: 57  ELGQLLTILFIVFG-----VSTGLYT 77
           +LG+ +  + ++ G     V TG+ T
Sbjct: 225 DLGRAIASVMMLLGWGVLAVPTGIVT 250