Pairwise Alignments

Query, 371 a.a., AAA family ATPase from Methanococcus maripaludis S2

Subject, 640 a.a., ATP-dependent zinc metalloprotease FtsH from Xanthobacter sp. DMC5

 Score =  150 bits (379), Expect = 9e-41
 Identities = 85/246 (34%), Positives = 143/246 (58%), Gaps = 10/246 (4%)

Query: 124 TFEEVVGQIDAKKKCKIVIKYLENPELF---GEWAPKNILFYGPPGTGKTMLARALATET 180
           TF++V G  +AK     ++++L +P+ F   G   P+ +L  GPPGTGKT+LARA+A E 
Sbjct: 155 TFDDVAGIDEAKSDLTEIVEFLRDPQKFQRLGGRIPRGVLLVGPPGTGKTLLARAIAGEA 214

Query: 181 DVPLYLIKATELIGDHVGDGSKQIESLYENASENTPSIIFIDELDAIALSRQFQSLRG-- 238
           +VP + I  ++ +   VG G+ ++  ++E A +N P IIFIDE+DA+   R    L G  
Sbjct: 215 NVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIIFIDEIDAVGRHRG-AGLGGGN 273

Query: 239 -DVSEVVNALLTELDGIKNNLGVVTIAATNNPEMLDNAI--RSRFEEEIEFKMPDDNERL 295
            +  + +N LL E+DG + N G++ IAATN P++LD A+    RF+ ++    PD   R 
Sbjct: 274 DEREQTLNQLLVEMDGFEANEGIILIAATNRPDVLDPALLRPGRFDRQVIVPNPDVVGRE 333

Query: 296 KILELYAEKMPIAVNADLKKYVEKTKGMNGRTIKEKFLKPALHKAILEDRESITQKDLDE 355
           +IL+++A K+P+A + +LK     T G +G  +     + AL  A   ++  +T  + ++
Sbjct: 334 QILKVHARKIPVAPDVNLKTIARGTPGFSGADLANLCNEAAL-MAARRNKRMVTMAEFED 392

Query: 356 IIKKIV 361
              K++
Sbjct: 393 AKDKVM 398