Pairwise Alignments

Query, 350 a.a., radical SAM protein from Methanococcus maripaludis S2

Subject, 341 a.a., 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB from Methanococcus maripaludis S2

 Score = 75.9 bits (185), Expect = 1e-18
 Identities = 60/238 (25%), Positives = 108/238 (45%), Gaps = 11/238 (4%)

Query: 37  CNLDDPCKFCFMS--TQKEKIKDPLKARRKPESILAESILMKRIGWKLEFISGGYGYKTE 94
           C+++  CK+C  +  T  E    P   R   + I + S+ ++  G K    S G+GY  +
Sbjct: 72  CSVNPKCKYCGFAAGTSSEGYVKPF--RSDDDQIKSSSVAIENSGIKRVSCSSGHGYNGK 129

Query: 95  ELNDTIEMVSYIQQAKQYLNVGIIDFENLNLN----NIEGVVGAVETVNPKLHEELCPGK 150
           E+   ++ V      +  +N G    E   L      I+ +   +ET N  +   + PG+
Sbjct: 130 EVIRALKAVKSASNLEVLVNAGADLTEECILELKKYKIDTICCNLETTNKTVFNNVKPGE 189

Query: 151 PLSNTKEMLKKAKDMGLKTGITIILGMGETEKDIDLLLNLIEELNLDRITFYSLNPQDET 210
            L +   + K  K  G++    +++G+GET +D    L  ++EL+++ I     NP  ET
Sbjct: 190 NLEDRINVCKMVKKHGVELSSGLLIGIGETYEDRVEHLFFLKELDVEEIPIMGFNPYKET 249

Query: 211 VFQGKTSVTTLEYMNWVSTVRLNFPKMKII--TGTWVDKLTNIGPLVMAGSNVITKFP 266
             +     + +E    ++ VRL FP ++I   T T   +L+    L+   SN+ T  P
Sbjct: 250 PMETCPKCSAIEQAKTIAIVRLLFPDIRITSPTPTMGPELSQFA-LLGGASNIATVIP 306