Pairwise Alignments

Query, 389 a.a., tRNA pseudouridine(13) synthase TruD from Methanococcus maripaludis S2

Subject, 352 a.a., tRNA pseudouridine synthase D, TruD from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score = 62.0 bits (149), Expect = 3e-14
 Identities = 46/146 (31%), Positives = 71/146 (48%), Gaps = 10/146 (6%)

Query: 8   EDFIVNEILEYELNDYGNYFLYKLQKNGIENLKAISYLSKNFEVPTKEIGYCGLKDRHAI 67
           EDF V+E+L+  L+  G +    ++K G+   +A   L++   V  + + Y GLKDR A+
Sbjct: 26  EDFQVDEVLDIPLSGDGEHLWLWVEKRGLNTEEAARRLARAAGVQLRTVSYAGLKDRQAL 85

Query: 68  TTQYVSIPKEYGKLSLD-----EDNLKLEYVGTIEKPLKIGRLYGNRF--EIIARAVDKD 120
           T Q+ SI    GK   D     +D L++   G  ++ L+ G    N F   +     DKD
Sbjct: 86  TRQWFSIQLP-GKADPDLSAAQDDTLQILKSGRHKRKLQRGAHAANGFTLRLTQLDADKD 144

Query: 121 EFLKIADNIRNLSSGAPNYYDDQRFG 146
              +  + I     G PNY+  QRFG
Sbjct: 145 ALNQRLETIAR--QGIPNYFGAQRFG 168