Pairwise Alignments

Query, 389 a.a., tRNA pseudouridine(13) synthase TruD from Methanococcus maripaludis S2

Subject, 430 a.a., tRNA pseudouridine(13) synthase TruD from Methanococcus maripaludis S2

 Score = 90.1 bits (222), Expect = 1e-22
 Identities = 105/406 (25%), Positives = 177/406 (43%), Gaps = 76/406 (18%)

Query: 8   EDFIVNEIL----------EYELND----YGNYFLYKLQKNGIENLKAISYLSKNFEVPT 53
           EDFIV EI           E    D    +G++  + ++K     + A+  + +  +   
Sbjct: 64  EDFIVEEITPEGTVLEVGKEIGFEDVEKWHGSFIHFTVEKTNWNTMDALKQIVRATKTKR 123

Query: 54  KEIGYCGLKDRHAITTQYVSIPKEYG--KLSLDEDNLK---LEYVGTIEKPLKIGRLYGN 108
           K  G+ G KD+ A+TTQ       +G  K  L+  N+K   +  V    K L++G L+GN
Sbjct: 124 KNFGFAGTKDKFAVTTQRFGC---FGLKKEQLENINIKDIVIRDVQKTNKKLRMGGLWGN 180

Query: 109 RFEIIARAVDKDEFLKIADNIRNLSSG-APNYYDDQRFGSV-----FNGKFIAKEILKGN 162
           +F I  R ++  E  K    I +L      NYY  QRFG +       GKFI +   +  
Sbjct: 181 KFTIKIRDLNLSE--KEIKRISDLKLDYVLNYYGIQRFGLIRPITHIVGKFIYERDFESA 238

Query: 163 YEEVVKILLTSYTKS-EKKQLKDLKRFIAKNWGNWDECLEYIDKKQIRSKMFRNMVKSLT 221
           +       +     S E +QL D+        G + + L+  ++     K    +++   
Sbjct: 239 FYTYCGTPINETGDSLEARQLVDM--------GEFKKALKLFNRGHDYEK---RLIQQYL 287

Query: 222 YENDFKKAFKYVDNRLKELFISAYQSYLWNECLKEFLKEVIPKENRIYVDYSCGTFLFYE 281
              DFK AF  +  +L  +F++AYQ+YL+NE + +              DY         
Sbjct: 288 KYKDFKMAFTALPPQLNSMFVNAYQAYLFNEMINK------------RFDYGF------- 328

Query: 282 NIEEELFDKLKEMDFPT---IVSDVEYTDP-EKRIIKAILKKERIKISDFEKLDFGKLKY 337
              +EL   + E + PT   I  D +++   +  I K I+++E + +  F+  DFG    
Sbjct: 329 ---DELEGDILEDNTPTGTLIGYDTKFSGGIQGEIEKEIVERENLDLKKFKIEDFGNFYG 385

Query: 338 TKRPIISIPEDVNTGKFKSDELNSKKYKIDLEFSLKKGSYATIILK 383
           T+R +++   D     FKS   N      +L F L++G+YATI+ +
Sbjct: 386 TRRKMVTPIYD-----FKSRFENE---IFELSFKLERGNYATIVTR 423