Pairwise Alignments

Query, 389 a.a., tRNA pseudouridine(13) synthase TruD from Methanococcus maripaludis S2

Subject, 349 a.a., tRNA pseudouridine(13) synthase TruD from Escherichia coli ECRC101

 Score = 69.3 bits (168), Expect = 2e-16
 Identities = 46/145 (31%), Positives = 76/145 (52%), Gaps = 9/145 (6%)

Query: 8   EDFIVNEILEYELNDYGNYFLYKLQKNGIENLKAISYLSKNFEVPTKEIGYCGLKDRHAI 67
           EDF+V E L +E +  G + L ++ KNG         L+K  ++  +E+ + G KD+HA+
Sbjct: 25  EDFVVVEDLGFEPDGEGEHILVRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAV 84

Query: 68  TTQYVSIPKEYGKLSLDEDNLKLEYVGTIE-----KPLKIGRLYGNRFEIIARAV-DKDE 121
           T Q++   +  GK   D    +LE    +E     + L++G L GN F ++ R V ++D+
Sbjct: 85  TEQWL-CARVPGKEMPDLSAFQLEGCQVLEYARHKRKLRLGALKGNAFTLVLREVSNRDD 143

Query: 122 FLKIADNIRNLSSGAPNYYDDQRFG 146
             +   +I     G PNY+  QRFG
Sbjct: 144 VEQRLIDI--CVKGVPNYFGAQRFG 166