Pairwise Alignments

Query, 389 a.a., tRNA pseudouridine(13) synthase TruD from Methanococcus maripaludis S2

Subject, 349 a.a., tRNA pseudouridine(13) synthase TruD from Dickeya dianthicola ME23

 Score = 64.7 bits (156), Expect = 4e-15
 Identities = 46/144 (31%), Positives = 65/144 (45%), Gaps = 7/144 (4%)

Query: 8   EDFIVNEILEYELNDYGNYFLYKLQKNGIENLKAISYLSKNFEVPTKEIGYCGLKDRHAI 67
           +DF V E L +  +  G   L +++K G         L+K   +P + + Y GLKDRHA+
Sbjct: 25  DDFFVAEDLGFAPDGDGEQVLVRVRKRGCNTTFVAEALAKFAGIPARSVSYAGLKDRHAV 84

Query: 68  TTQYVSIPKEYGKLSLDEDNLKLEYVGTIE-----KPLKIGRLYGNRFEIIARAVDKDEF 122
           T Q+  +    GK         LE    +E     + L+IG L GN F ++ R V  D  
Sbjct: 85  TEQWFCLHLP-GKAEPAWSAFALEGCEILEAQRHRRKLRIGALRGNHFSLVLREV-SDRA 142

Query: 123 LKIADNIRNLSSGAPNYYDDQRFG 146
              A        G PNY+  QRFG
Sbjct: 143 EVDARLALIAGEGVPNYFGSQRFG 166