Pairwise Alignments

Query, 355 a.a., DNA cytosine methyltransferase from Methanococcus maripaludis S2

Subject, 348 a.a., DNA-cytosine methyltransferase from Pseudomonas putida KT2440

 Score = 88.6 bits (218), Expect = 2e-22
 Identities = 92/375 (24%), Positives = 152/375 (40%), Gaps = 80/375 (21%)

Query: 4   IDLFCGCGGFSRGFVEMGFKPLLAIELDENAANSYALNYNGTVFEKKLNDILEKDVYFKL 63
           + LFCG GG   GF++ GF  + A + D  A  +Y  N+ G    K              
Sbjct: 26  VSLFCGAGGLDLGFIDAGFDVVFAADHDRYAVETYNHNHPGQRASKV------------- 72

Query: 64  EDFLVQDDIEEFKKSNNYENLNPVVINEDIREINSKYITNKIKDTSYSKIDVIIGGPPCE 123
            D L     E +K+S                          ++      I  IIGGPPC+
Sbjct: 73  -DLLETSPEELYKRS-------------------------VLEPGFEGAIHGIIGGPPCQ 106

Query: 124 GYTGANPKRERSPFNRLYRDPVGRLVLDYIRIVGDISP----EVFVMENVPGILNYETRE 179
           G++ AN         R + DP  +L + Y  IV         + F+ ENVP IL  +  +
Sbjct: 107 GFSRANTA-------RCHSDPRNQLAVKYADIVNYFYKHSRIKFFLFENVPEILAKKNAD 159

Query: 180 NIEKEFSRAGYD-ELYFHVFDSENYGNPSFRKRVIILNIPLNLEKTDNVDVKTALSNIDR 238
            +E   +R   +  +Y    +S  +G    R+R  I  I   ++          ++N   
Sbjct: 160 FLEMLRARLSKNFVVYEKEINSSGFGVAQHRRRYFIAGISKEIKNKAFTFPDATVNNF-- 217

Query: 239 NALNNEKYPLPEKIAKSIHKIKIGGS-AVKF------------------KACGGVLDNYI 279
             + +E   LP  +  S    ++ GS A+ F                     GG   ++I
Sbjct: 218 RTVEDEISGLPHPVYYS----RVAGSEAIPFHPNHWTMKPKSKRFLTGEMPVGG--RSFI 271

Query: 280 RLSMEGNAETV-MGKRRF-IHPEEDRLLTVREQARLMSYPDTHIFAGGITAQYNQVGESV 337
           +L  +  + TV  G R   +HP+  R L++ E  +L  +PD++   G ++AQ  Q+  +V
Sbjct: 272 KLEWKKPSRTVAYGNREIHVHPDGHRRLSIYEAMKLQGFPDSYRLMGTLSAQVKQISNAV 331

Query: 338 PPSLSLAIAKEVKKY 352
           PP ++ A+AK  K++
Sbjct: 332 PPPVAAALAKCFKEF 346