Pairwise Alignments

Query, 304 a.a., AEC family transporter from Methanococcus maripaludis JJ

Subject, 315 a.a., putative Membrane protein from Pseudomonas putida KT2440

 Score = 60.5 bits (145), Expect = 5e-14
 Identities = 62/295 (21%), Positives = 127/295 (43%), Gaps = 12/295 (4%)

Query: 4   MEIMYVIVFLILIGYISRHFKILDEKDRMVLNKIVIYIAMPATIFLQLLTNVTPSDLPEF 63
           + I   +  ++ +G + +   ++D+    V +++V  + MPA +FL     +  +DL   
Sbjct: 11  LNITAPVFAMLFMGVLLKRIHLIDDNFNRVASQLVFNVCMPALLFL----GIYHADLAAA 66

Query: 64  MKLPIIIFISTAACALLAYIVGKRL-KLDNKSLGGFVLVASIGNTGFLGYPVILGFYGEQ 122
           +K  +I++   A     A   G  + +      G +   A  GN G +G  +    YG+ 
Sbjct: 67  VKPGVILYFIVATLVGFAIAWGMAIWRSPMADRGIYTQGAFRGNNGVIGLALAASLYGDY 126

Query: 123 GL-LRAIFCDMSAIFCSMLLGTYIGVKLSGAKK---SILKEVFTFPPLFTGIFTLILVLL 178
           G+ L A+   +  +  + L    + V     K    SI K +F+ P + + +    +   
Sbjct: 127 GISLGAVLAGLVILMYNSLSAVVLAVYSPDLKSDPWSICKSIFSNPLIISVLVAAPMAYG 186

Query: 179 HVNLSIFPEFFTKSLEYMSSATIPLIMLSLGLSLSPKAAKFGIFYGILASIFRMVISPLV 238
            V L   P +   S +Y++  T+PL ++ +G +LS  A +      I AS  +M+  PL+
Sbjct: 187 QVPL---PNWLLTSGDYLAQMTLPLALICIGGTLSLAALRNCGRLAIDASFVKMLWLPLL 243

Query: 239 AFPISESILSNQLDKQVTIMQSAMPSAMMPLVYAVIYDLDVKLVASACFVSTVVS 293
               +        +  +  +    P+A    V A   + + +L AS   ++T+++
Sbjct: 244 GTLGAWLCGFRGAELGILFLYIGSPTAAASYVMARAANGNHELAASIIVITTLMA 298