Pairwise Alignments

Query, 254 a.a., transporter substrate-binding domain-containing protein from Methanococcus maripaludis JJ

Subject, 261 a.a., amino acid ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 73.9 bits (180), Expect = 3e-18
 Identities = 65/252 (25%), Positives = 112/252 (44%), Gaps = 5/252 (1%)

Query: 2   KRHSIGITILLFLLSISIISGCISS-QNTMKRGTLTVGVCAQYPPT-IYEENGNLAGFDF 59
           KR+S  +T L   L +S      +   + + RGTL V V   +PP      +    G D 
Sbjct: 3   KRYSALLTALFASLMLSQAPAQANGLDDIVARGTLKVAVPQDFPPFGSVGPDMKPRGLDI 62

Query: 60  DLMNEIAKRMKLNTNFKIYNSKSELFDALEKNEVDC-IGSRTVNYERRKFIDFTRVYYYD 118
           D    +A ++K+       NS + +   L   +VD  I S   N ER K IDF++ Y   
Sbjct: 63  DTAKLLADQLKVKLELTPVNSTNRI-PFLTTGKVDLVISSLGKNAEREKVIDFSKAYAPF 121

Query: 119 SVRVAVPESSSVTMLKELKGKNLGVIEGSVSSELVESYLTNVGCKCIYYDTPENLTYAVE 178
            + V  P  ++++   +LKGK + V  G++    + +          + D    +  A  
Sbjct: 122 YLAVFGPPEAAISSTDDLKGKTISVTRGAIEDIELTAVAPKEATIKRFEDNNSTIA-AYL 180

Query: 179 NGEVDAVIGHEMYIEHISTKCNVQKRYLDEKLSVSYWAIPINKNNPNLRNSINDVLLEME 238
            G+VD +    + +  IS +   +   L  KL  S   + +NKN P L   +N +L+  +
Sbjct: 181 AGQVDLIASGNVVMVAISERSPKRVPALKVKLKDSPVYVGVNKNEPALLEKVNQILVAAK 240

Query: 239 NDGTLDELKLKW 250
            DG+L++  ++W
Sbjct: 241 ADGSLEKNAMQW 252