Pairwise Alignments

Query, 254 a.a., transporter substrate-binding domain-containing protein from Methanococcus maripaludis JJ

Subject, 258 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 72.8 bits (177), Expect = 7e-18
 Identities = 58/224 (25%), Positives = 105/224 (46%), Gaps = 11/224 (4%)

Query: 38  GVCAQYPP-TIYEENGNLAGFDFDLMNEIAKRMKLNTNFKIYNSKSELFDALEKNEVDCI 96
           GV  +YPP      +G+L GFD +L N I  ++++   + ++N    +  AL   + D I
Sbjct: 30  GVFPEYPPFESVAADGSLQGFDIELGNAICAKLEVKCTW-VHNEFDGMIPALRARKFDAI 88

Query: 97  -GSRTVNYERRKFIDFTRVYYYDSVRVAVPESSSVTMLKE-LKGKNLGVIEGSVSSELVE 154
             S  V   R K IDF+   +     V   +S+      E L GK +GV++GS+      
Sbjct: 89  MSSMAVTPAREKIIDFSDRLFLSPTSVITRKSADFGDTPESLMGKQVGVLQGSLQEAYAR 148

Query: 155 SYLTNVGCKCIYYDTPENLTYAVENGEVDAVIGH--EMYIEHIS----TKCNVQKRYLDE 208
           ++L  +G +   Y + +     ++NG +DA +    E  +  +S    +       + D 
Sbjct: 149 AHLAKLGAQIKAYQSQDQNYADLQNGRLDATLTDKLEAQLNFLSKPEGSDFKTGPAFKDP 208

Query: 209 KLSVSYWAIPINKNNPNLRNSINDVLLEMENDGTLDELKLKWYG 252
            L +   A+ + KN+  LR  IN  +  ++ DGT  +++ K++G
Sbjct: 209 TLPLDI-AMGLRKNDQALRALINKGIAAVQADGTYAQIQKKYFG 251