Pairwise Alignments

Query, 254 a.a., transporter substrate-binding domain-containing protein from Methanococcus maripaludis JJ

Subject, 254 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score = 85.5 bits (210), Expect = 1e-21
 Identities = 61/222 (27%), Positives = 106/222 (47%), Gaps = 5/222 (2%)

Query: 35  LTVGVCAQYPPTIYE-ENGNLAGFDFDLMNEIAKRMKLNTNFKIYNSK-SELFDALEKNE 92
           LTV   A Y P  +E ++  + GFD D++N IAK+  L    KI N+  + +F AL   +
Sbjct: 30  LTVASSATYAPFAFENKDKQIVGFDIDIINAIAKQQGLK--IKIVNTPFTGIFGALNNGD 87

Query: 93  VDCIGSR-TVNYERRKFIDFTRVYYYDSVRVAVPESSSVTMLKELKGKNLGVIEGSVSSE 151
           VD + S  T+N +R++  DFT  Y+     +A+P++S VT LK+L GK + V+  S + +
Sbjct: 88  VDLVISGVTINDKRKQSYDFTPPYFAARQLIALPKNSKVTSLKDLAGKKIAVVSASTADD 147

Query: 152 LVESYLTNVGCKCIYYDTPENLTYAVENGEVDAVIGHEMYIEHISTKCNVQKRYLDEKLS 211
           +              +++   +   +  G VDA +G    I +   +    K   D+   
Sbjct: 148 IASREFGKTSPDIRRFESTPLIISELAGGGVDAAMGDNGVIAYRVAQNPDLKTIDDKSFP 207

Query: 212 VSYWAIPINKNNPNLRNSINDVLLEMENDGTLDELKLKWYGK 253
              + I + K +  L + +   L  +  DG+   +  KW+ K
Sbjct: 208 EEGFGIVVKKGDKALLDKLTAGLAAIRADGSYVTIYKKWFNK 249