Pairwise Alignments

Query, 254 a.a., transporter substrate-binding domain-containing protein from Methanococcus maripaludis JJ

Subject, 254 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis JJ

 Score =  179 bits (455), Expect = 4e-50
 Identities = 98/250 (39%), Positives = 148/250 (59%), Gaps = 8/250 (3%)

Query: 9   TILLFLLSISII---SGCISSQ----NTMKRGTLTVGVCAQYPPTIYEENGNLAGFDFDL 61
           TIL+ + S+ I+   SGCISS     NT+  G LTVG+  + PP  Y E G L GFD DL
Sbjct: 5   TILVIISSVLILTSFSGCISSYGKEYNTVTPGVLTVGITPEMPPQQYYEEGELKGFDIDL 64

Query: 62  MNEIAKRMKLNTNFKIYNSKSELFDALEKNEVDCIGSRTVNYERRKFIDFTRVYYYDSVR 121
           M EIA  M L   FKIY       +AL   E+DC+ S T++ ER++ +DF+R Y    V 
Sbjct: 65  MKEIANNMGLKPEFKIYEYGGA-HEALLNGEIDCLPSMTISPERKEDMDFSRAYIQTYVV 123

Query: 122 VAVPESSSVTMLKELKGKNLGVIEGSVSSELVESYLTNVGCKCIYYDTPENLTYAVENGE 181
           VAV E+S    LK+L GKN+ V+  + + +  + YL ++      YD+ + L   + +  
Sbjct: 124 VAVFENSPYRELKDLNGKNIAVVTNTYTEDWAKDYLGSINANIKSYDSIQGLVSDIYSKN 183

Query: 182 VDAVIGHEMYIEHISTKCNVQKRYLDEKLSVSYWAIPINKNNPNLRNSINDVLLEMENDG 241
           +DAV+  ++ +++ S + + + R + EK+++ YWAI + K+N +L+N IND L E+E + 
Sbjct: 184 IDAVVTDQIQLDYYSKQKSFESRLIFEKMTIEYWAIAVKKDNHDLQNEINDALFELEENE 243

Query: 242 TLDELKLKWY 251
            L ELK KWY
Sbjct: 244 ALYELKNKWY 253