Pairwise Alignments

Query, 254 a.a., transporter substrate-binding domain-containing protein from Methanococcus maripaludis JJ

Subject, 243 a.a., Arginine ABC transporter, periplasmic arginine-binding protein ArtJ from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 78.2 bits (191), Expect = 1e-19
 Identities = 64/249 (25%), Positives = 113/249 (45%), Gaps = 18/249 (7%)

Query: 10  ILLFLLSISIISGCISSQNTMKRGTLTVGVCAQYPP-TIYEENGNLAGFDFDLMNEIAKR 68
           ++L  L  S  +G I+++       +  GV A YPP    + +  + GFD DL   + K+
Sbjct: 4   LVLAALLASFATGSIAAEK------INFGVSATYPPFESLDASNKIVGFDIDLATALCKQ 57

Query: 69  MKLNTNFKIYNSKSELFDALEKNEVDC-IGSRTVNYERRKFIDFTRVYYYDSVRVAVPES 127
           M+    F  +   S L  AL+  + D  I    +  ER K + F+  YY +S  V   + 
Sbjct: 58  MQAECTFTNHAFDS-LIPALKFRKYDAVISGMDITPERSKQVAFSNPYYANSALVIAKKD 116

Query: 128 SSVTMLKELKGKNLGVIEGSVSSELVESYLTNVGCKCIYYDTPENLTYAVENGEVDAVIG 187
           +  T   +LKGK +G+  G+   + ++     V  K + YD+ +N    ++NG +D V G
Sbjct: 117 TYKTFT-DLKGKRIGMENGTTHQKYLQDKHPEV--KTVAYDSYQNAIIDLKNGRIDGVFG 173

Query: 188 HEMYIEHISTKCNVQKRYLDEKLSVSYW-----AIPINKNNPNLRNSINDVLLEMENDGT 242
               +     K N Q     EK++   +      I +  +N  L   +N+ L  ++ DGT
Sbjct: 174 DTAVVNE-WLKTNPQLGPATEKVTDPQYFGTGLGIAVRPDNKALLEKLNNALAAIKADGT 232

Query: 243 LDELKLKWY 251
             ++  +W+
Sbjct: 233 YQKISDQWF 241