Pairwise Alignments

Query, 161 a.a., 4Fe-4S binding protein from Methanococcus maripaludis JJ

Subject, 182 a.a., NADH dehydrogenase from Pseudomonas simiae WCS417

 Score = 47.0 bits (110), Expect = 2e-10
 Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 10/59 (16%)

Query: 112 KKCVMCLVCTKNCPFGAIS----ESDDN------ISFDMDKCVLCGHCEEICPAKAIKL 160
           ++CV C +C   CP G IS    E++D          +  +C+ CG CEE CP  AI+L
Sbjct: 60  ERCVACNLCAVACPVGCISLQKAETEDGRWYPDFFRINFSRCIFCGLCEEACPTTAIQL 118



 Score = 45.1 bits (105), Expect = 6e-10
 Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 10/60 (16%)

Query: 36  ELCILCNRCLEVCPVTAISSNFPEVPD----------IDNKCVYCNTCVETCPVDAIKIT 85
           E C+ CN C   CPV  IS    E  D            ++C++C  C E CP  AI++T
Sbjct: 60  ERCVACNLCAVACPVGCISLQKAETEDGRWYPDFFRINFSRCIFCGLCEEACPTTAIQLT 119



 Score = 44.3 bits (103), Expect = 1e-09
 Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 8/74 (10%)

Query: 61  PDIDNKCVYCNTCVETCPVDAIKITKTRVRVEQGNLIIENRLKSKKLDYNRKKCVMCLVC 120
           PD + +CV CN C   CPV  I + K            + R        N  +C+ C +C
Sbjct: 56  PDGEERCVACNLCAVACPVGCISLQKAETE--------DGRWYPDFFRINFSRCIFCGLC 107

Query: 121 TKNCPFGAISESDD 134
            + CP  AI  + D
Sbjct: 108 EEACPTTAIQLTPD 121



 Score = 31.2 bits (69), Expect = 1e-05
 Identities = 13/31 (41%), Positives = 16/31 (51%)

Query: 23  DSQYISNKIEINPELCILCNRCLEVCPVTAI 53
           D ++  +   IN   CI C  C E CP TAI
Sbjct: 86  DGRWYPDFFRINFSRCIFCGLCEEACPTTAI 116



 Score = 24.3 bits (51), Expect = 0.001
 Identities = 8/21 (38%), Positives = 11/21 (52%)

Query: 141 DKCVLCGHCEEICPAKAIKLE 161
           ++CV C  C   CP   I L+
Sbjct: 60  ERCVACNLCAVACPVGCISLQ 80