Pairwise Alignments

Query, 161 a.a., 4Fe-4S binding protein from Methanococcus maripaludis JJ

Subject, 180 a.a., Formate hydrogenlyase complex 3 iron-sulfur protein; Formate hydrogenlyase subunit 6; Ni,Fe-hydrogenase III medium subunit from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 55.1 bits (131), Expect = 6e-13
 Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 6/61 (9%)

Query: 106 KLDYNRKKCVMCLVCTKNCPFGAISESDDNIS------FDMDKCVLCGHCEEICPAKAIK 159
           K ++N ++C+ C  C   CP  A++   D  +      F++ +C+ CG CEE+CP  AIK
Sbjct: 32  KPEHNPQQCIGCAACVNACPSNALTVETDLATNELAWQFNLGRCIFCGRCEEVCPTAAIK 91

Query: 160 L 160
           L
Sbjct: 92  L 92



 Score = 44.7 bits (104), Expect = 8e-10
 Identities = 33/110 (30%), Positives = 47/110 (42%), Gaps = 16/110 (14%)

Query: 30  KIEINPELCILCNRCLEVCPVTAIS------SNFPEVPDIDNKCVYCNTCVETCPVDAIK 83
           K E NP+ CI C  C+  CP  A++      +N         +C++C  C E CP  AIK
Sbjct: 32  KPEHNPQQCIGCAACVNACPSNALTVETDLATNELAWQFNLGRCIFCGRCEEVCPTAAIK 91

Query: 84  ITKTRVRVEQGNLIIENRLKSKKLDYNRKKCVMCLVCTKNCPFGAISESD 133
           ++      ++  L +    K   L  +R     C VC  N PF    E D
Sbjct: 92  LS------QEYELAVWK--KEDFLQQSRFALCNCRVC--NRPFAVQKEID 131



 Score = 38.9 bits (89), Expect = 5e-08
 Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 17/86 (19%)

Query: 52  AISSNFPEVPDID-NKCVYCNTCVETCPVDAIKITKTRVRVEQGNLIIENRLKSKKL--D 108
           A+  NF   P+ +  +C+ C  CV  CP +A              L +E  L + +L   
Sbjct: 24  AVDKNFRGKPEHNPQQCIGCAACVNACPSNA--------------LTVETDLATNELAWQ 69

Query: 109 YNRKKCVMCLVCTKNCPFGAISESDD 134
           +N  +C+ C  C + CP  AI  S +
Sbjct: 70  FNLGRCIFCGRCEEVCPTAAIKLSQE 95



 Score = 23.9 bits (50), Expect = 0.002
 Identities = 7/20 (35%), Positives = 12/20 (60%)

Query: 142 KCVLCGHCEEICPAKAIKLE 161
           +C+ C  C   CP+ A+ +E
Sbjct: 39  QCIGCAACVNACPSNALTVE 58