Pairwise Alignments

Query, 658 a.a., CoB--CoM heterodisulfide reductase iron-sulfur subunit A family protein from Methanococcus maripaludis JJ

Subject, 719 a.a., 4Fe-4S ferredoxin from Ralstonia solanacearum UW163

 Score = 48.5 bits (114), Expect = 1e-09
 Identities = 25/68 (36%), Positives = 33/68 (48%), Gaps = 2/68 (2%)

Query: 569 QFKIEMIRATVNEEVCGGCKVCALMCPYNAITYEEKDGHLVAITDDVACKGCGACAAACP 628
           Q+K  +     N +V  GC+ C  +C   AI  + KDG          C GCGAC  ACP
Sbjct: 320 QYKASICAHGRNGQV--GCEACVQVCSAAAIASQWKDGRGSVHVTPNLCVGCGACTTACP 377

Query: 629 SGAMQLRY 636
           +GA+   Y
Sbjct: 378 TGALTYAY 385



 Score = 45.4 bits (106), Expect = 9e-09
 Identities = 58/248 (23%), Positives = 87/248 (35%), Gaps = 54/248 (21%)

Query: 67  VVAACTPKIHEPTFRGCLQDAGISPYYLEFVNIREHDAFVHMG--DVEGATRKACEMIAG 124
           VV ACT +  +  F       G     + FVN+RE   +      D  G   K   ++A 
Sbjct: 58  VVVACTQE--QALFTEVAAQHGGVTAPIHFVNVRETGGWSAGARRDARGFHAKTAALLA- 114

Query: 125 GVERAKKLEDVPQKVVDVDKSCMVIGAGIAGIQSALDLGDQ-GFKVYLVDKDESIGGRMA 183
            V      + VP      D + +++G     +  A  L D     V    +D + G    
Sbjct: 115 -VAGLPAPDPVPVVDYRSDGNLLIVGPAERVLPWAERLADPLSVTVLATGRDRTAGPLSP 173

Query: 184 QLAKTFPTDDCAMUILAPKMVSAANHPNIELITFAEIKNIDGYIGNFDVTLEKKPRYVDE 243
            +A+ +P                        +   E+  + G++G FDV    +   +D 
Sbjct: 174 PMARRWP------------------------VHAGELAQVGGWLGAFDVQWHSR-NPIDL 208

Query: 244 DTCTGCGACAAACPIEVPNEFDLGLGTRKAIYVPFPQAVPLLYTIDKEHCIDCGLCAKVC 303
           D CT C AC  ACP +                     A+  LY ID + C D   C K  
Sbjct: 209 DRCTRCNACIDACPED---------------------AIDTLYQIDLDACRDHRDCVK-A 246

Query: 304 CAEAVRYD 311
           C EA+  D
Sbjct: 247 CGEAMAID 254



 Score = 37.4 bits (85), Expect = 2e-06
 Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 16/68 (23%)

Query: 241 VDEDTCTGCGACAAACPIEVPNEFDLGLGTRKAIYVPFPQAVPLLYTIDKEHCIDCGLCA 300
           VD   CT C AC +ACP +   +                QA   + ++ + +C+ CGLC 
Sbjct: 586 VDRARCTLCMACVSACPSQALRD----------------QAEQPVLSMIERNCVQCGLCE 629

Query: 301 KVCCAEAV 308
             C  +A+
Sbjct: 630 TTCPEDAI 637