Pairwise Alignments

Query, 788 a.a., CDC48 family AAA ATPase from Methanococcus maripaludis JJ

Subject, 639 a.a., Cell division protein FtsH (EC 3.4.24.-) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  210 bits (534), Expect = 2e-58
 Identities = 107/247 (43%), Positives = 162/247 (65%), Gaps = 4/247 (1%)

Query: 504 IKWSDVGGLEDIKQDLKEAVEWPIKNKEMFERMGIRPPKGVLLFGPPGTGKTLLAKAVAN 563
           + ++DV G ++ K+++KE V++ +K+   F+++G R P+G+LL GPPGTGKTLLAK +A 
Sbjct: 158 VTFADVAGCDEAKEEVKEVVDF-LKDPAKFQKLGGRIPRGLLLVGPPGTGKTLLAKGIAG 216

Query: 564 ESEANFISVKGPEIFSKWVGESEKAIREIFRKARQAAPTVIFFDEIDSVAPKRGMDFGSS 623
           E++  F S+ G +    +VG     +R++F  A++ AP +IF DEID+V  +RG   G  
Sbjct: 217 EAKVPFFSISGSDFVEMFVGVGAARVRDMFENAKKNAPCIIFIDEIDAVGRQRGAGLGGG 276

Query: 624 G-VTEKVVNQLLTELDGLEEPKDVVIIAATNRPDILDQALLRPGRLDRIVLVPIPNETAR 682
               E+ +NQ+L E+DG E    V+++AATNRPDILD ALLRPGR DR V V +P+   R
Sbjct: 277 NDEREQTLNQMLVEMDGFETNLGVIVVAATNRPDILDAALLRPGRFDRQVYVTLPDIRGR 336

Query: 683 LEIFKVHTKGMPIGKDVNLEKLAKETKGYTGADIEAVCREAAMIALRENINSEHVESRHF 742
            +I  VH + +P+G DVN   +A+ T G +GAD+  +C EAA++A R   N+  VE + F
Sbjct: 337 EQILNVHMRKVPLGTDVNASVIARGTPGMSGADLANLCNEAALMAARR--NARVVEMQDF 394

Query: 743 DGAFKRI 749
           + A  +I
Sbjct: 395 EKAKDKI 401



 Score =  173 bits (439), Expect = 2e-47
 Identities = 88/200 (44%), Positives = 130/200 (65%), Gaps = 4/200 (2%)

Query: 174 VTYEDIGGLKEEVKKIREMVELPMRYPELFDKLGIEPPKGVLLAGPPGTGKTLLAKAVAN 233
           VT+ D+ G  E  ++++E+V+  ++ P  F KLG   P+G+LL GPPGTGKTLLAK +A 
Sbjct: 158 VTFADVAGCDEAKEEVKEVVDF-LKDPAKFQKLGGRIPRGLLLVGPPGTGKTLLAKGIAG 216

Query: 234 EAGANFYTINGPEIMSKYVGETEENLRKIFEEAEENSPSIIFIDEIDAVAPKRDEASG-- 291
           EA   F++I+G + +  +VG     +R +FE A++N+P IIFIDEIDAV  +R    G  
Sbjct: 217 EAKVPFFSISGSDFVEMFVGVGAARVRDMFENAKKNAPCIIFIDEIDAVGRQRGAGLGGG 276

Query: 292 -EVERRMVAQLLTLMDGLESRGQLVILAATNRPDSIDMALRRPGRLDREITIGIPDRHGR 350
            +   + + Q+L  MDG E+   ++++AATNRPD +D AL RPGR DR++ + +PD  GR
Sbjct: 277 NDEREQTLNQMLVEMDGFETNLGVIVVAATNRPDILDAALLRPGRFDRQVYVTLPDIRGR 336

Query: 351 NEILQIHTRNMPLQPDYEKS 370
            +IL +H R +PL  D   S
Sbjct: 337 EQILNVHMRKVPLGTDVNAS 356